Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2119 ATGGCGGACTCAGTTGATGTGATTTTGGACTTTCTTAGGAGGAATCGTTTCACCAGAGCTGAGGCTGCTTTGCTCACTGAGATCAATAATCTTCCCGACTTGAATGCCAATCCTCAAGGTCTAGAACTCATTGTCAAGGAAATAGAGTGTGGGAATGGTAATGCCCATTTGCAAGCAACTTCTGCTCCCTCTATTCTTTTCTCCAACACTTCCGAGGAGGATTTTTTATACTCGCGGAACTTCAACCCCTCCACTGTTCCTGTTAAGCCCTCTGTATCTCAAACTAATGAAGCTGTTGATGTAATTGCCGCCAATACCAATTCAAAGTCCTGGTCTGTGGAGGAAAATGCTGTATCCATGTGGCCTGCTAGTAGTAGTAAAACCTCTGTTGTGCAAAGCAAACAACCTATGGAACTTGATCGCCAACTTAAATTCAATACTCCATCTCTTAAAGTGAACTTTACAGATTATCCCTGGTCAAGAACGGATGACAATATGAATTCGTCTTCAGACTCCGCCAAAGATTGTTCTGTCAAGACTATCTTCCCCTTCTCTAAAGGGGATATGTCTTCAAGCTTTGGTGCTGTCACTTATTCTGACAAAAAAGAGGAGAAAAAAAAGGTAGAAATTAGTGATACTAGGACATCATCTATTAAAGAGCAGGTGGGTGAACTGGGGAGGCCTATTTACTTGGTCAAGACACCAGGCAGTTCTGAACAGAAGATCATAGGCAGCTTAAGTTTTCCTCTCCTCCCTGAAAATCAGAAGGAAGAGTTTCCTAGCCTTCCTCCGGTTAAACTCAAGTCAGATGACAAGCCCTTGGTTGTTAATTGGGAGGAGAAGTTTGAGCGAGATGGACCAACCTCAAAACTCCCTGGTGCTGATAGCACTTTGCTTATTGGTTCGTATCTGGATGTACCTATCGGACAGGAAATTAACCCTTCAGGTATGAGGAGGGCTACAGGGGGCAGTTGGTTATCTGTAAGTCAAGGGATAGCAGAGGATACATCTGATCTTGTATCAGGATTTGCTACAGTTGGTGATGGGTTGAGTGAATCTATTGATTATCCGAATGAATTTTGGGACTCCGATGAATATGATGATGATGAGGATGTTGGGTACATGAGACAACCTATTGAGGATGAGGCCTGGTTTTTGGCGCATGAAATTGATTACCCTAGTGACAATGAAAAGGGGACTGGACATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTTTCCGGGGAACGATATCTTCAGGAAAATAATGTTGTACCTGTCACTACTACTGATGATCCTATTGGTGTAACACTTACTGAGTATGGAAGGACTAATGATAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTGAACTTGATGTGTGCAGAACCGGTCTGGCGGGGCTTTGTCCCTCAGACAAATGAACTCATCATGCTAGGAGATGGGAGGGTTTTGAATGATAATCTAAGATCACGGCTAGAGGACATCAATATGGATGATGATCAACATGGTTCAGTTAGGTCAATTGGGGTAGGGATCAACAGTGATGCTGCAGATATTGGTAGTGAAGTGCGTGAAAGTTTGGTTGGTGGTAGTAGTGAAGGAGATTTAGAATATTTCCATGATCGTGATGCAGGACTTGGTGGCTCCAGACACTCTCATCATGATTTGGATAAGAAATCTACTAACAAATCAAACAAAAATAAGAACAATGAAAAGAGTGAGTCAAATAAATATGTCATAGGATGTGACAAAGATGCACCATTGCAGATGAAAACTCATGGTGATGGAAACTTTTCATTTCCCCTATCTTTGAAGGATGGTCAGATGATTCAGGCTTCCACCAATAAGTCCCTGTGGTCAAATAACGGCAACGCAGATGATGCTGATGACTGTCTTAGTGCAATTGTGGAAACTGATGACATGCTTGCTTTGTGGAGGCGAAAGAGCAGCGATTCGTCACCTGTTAAAAGTTCTAGGGATGAGAATAATGCCAACTTTGTAAGATCCACAAACTCTTCTCCAACAACAGTCTCAAATTATGGGTATTCTGAAAGAGAGCATGTGAAAGTAGAAGAAGATGAAAAGACTGGAATTGCAAGGGAAGATGATCTAGGAGCATCGCTAGAGGATGAAGAGGTAGCTGCTGTGCAAGAGCAAGTAAGGCAGATAAAGGCACAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTTCACAGAAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGAAGGTATCATGTTACTGAATATTTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTACATACAGGCATGGATGTTTGTGTTAAAATTATAAAAAACAACAAGGACTTTTTTGACCAAAGTCTTGACGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGCAGACAAGTATCACATTCTTCGATTATATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCAAACTTGTATGAGTTTCATAAATTTAATAGAGAATCAGGTGGTGAAGTGTACTTTACAATGCCAAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCTCTTCAGTTTTTGCATAGCCTTGGACTAATACACTGCGACTTGAAACCAGAGAATATTTTGGTTAAAAGCTATAGTAGGTGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAAACAGATCACCTTTGCTCTTATGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGACTTCCATATGACAAGAAGATTGATATCTGGTCTCTTGGCTGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGATCCAATTGATCAAAGTATGCTTGCAAAAGGACGCGACACATATAAGTACTTCACCAAAAATCACATGCTTTATGAAAGGAATCAGGAAACCAACCGGTTAGAATACTTGGTACCAAAAAAGACATCCTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTTGCTCACTTGCTAGAAGTCAACCCTAAGAAGCGGCCCTCTGCATCTGAGGCCCTGAAGCATCCATGGTTGTCATACCCATATGAACCCATATCATCTTGA 3300 0.4115 MADSVDVILDFLRRNRFTRAEAALLTEINNLPDLNANPQGLELIVKEIECGNGNAHLQATSAPSILFSNTSEEDFLYSRNFNPSTVPVKPSVSQTNEAVDVIAANTNSKSWSVEENAVSMWPASSSKTSVVQSKQPMELDRQLKFNTPSLKVNFTDYPWSRTDDNMNSSSDSAKDCSVKTIFPFSKGDMSSSFGAVTYSDKKEEKKKVEISDTRTSSIKEQVGELGRPIYLVKTPGSSEQKIIGSLSFPLLPENQKEEFPSLPPVKLKSDDKPLVVNWEEKFERDGPTSKLPGADSTLLIGSYLDVPIGQEINPSGMRRATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESIDYPNEFWDSDEYDDDEDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEDDDQSFAEEDSYFSGERYLQENNVVPVTTTDDPIGVTLTEYGRTNDNDLMAQYDGQLMDEEELNLMCAEPVWRGFVPQTNELIMLGDGRVLNDNLRSRLEDINMDDDQHGSVRSIGVGINSDAADIGSEVRESLVGGSSEGDLEYFHDRDAGLGGSRHSHHDLDKKSTNKSNKNKNNEKSESNKYVIGCDKDAPLQMKTHGDGNFSFPLSLKDGQMIQASTNKSLWSNNGNADDADDCLSAIVETDDMLALWRRKSSDSSPVKSSRDENNANFVRSTNSSPTTVSNYGYSEREHVKVEEDEKTGIAREDDLGASLEDEEVAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIDPIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLVPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS* 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2119 1099 MobiDBLite consensus disorder prediction 680 706 - -
Gso5g2119 1099 SUPERFAMILY Protein kinase-like (PK-like) 777 1092 IPR011009 -
Gso5g2119 1099 MobiDBLite consensus disorder prediction 392 425 - -
Gso5g2119 1099 Gene3D Transferase(Phosphotransferase) domain 1 842 1090 - -
Gso5g2119 1099 MobiDBLite consensus disorder prediction 671 707 - -
Gso5g2119 1099 CDD PKc_DYRK_like 788 1090 - -
Gso5g2119 1099 Gene3D Phosphorylase Kinase; domain 1 782 869 - -
Gso5g2119 1099 MobiDBLite consensus disorder prediction 562 602 - -
Gso5g2119 1099 SMART serkin_6 788 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g2119 1099 ProSiteProfiles Protein kinase domain profile. 788 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g2119 1099 PANTHER - 207 1097 - -
Gso5g2119 1099 PANTHER DUAL SPECIFICITY PROTEIN KINASE 207 1097 - -
Gso5g2119 1099 Coils Coil 740 760 - -
Gso5g2119 1099 ProSitePatterns Serine/Threonine protein kinases active-site signature. 914 926 IPR008271 GO:0004672|GO:0006468
Gso5g2119 1099 Pfam Protein kinase domain 788 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2119 Gso-Chr5 44106060 44117812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g2119 787 1085 MAP Kinase Gene Family AT5G19010 31.034 5.71e-29 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Gso5g2119 Pkinase 6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2119 - - gmx:100797095 2166.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2119 5 44106060 44117812 Gso8g0480 8 4411503 4422155 GST
Gso5g2119 5 44106060 44117812 Gso16g1757 16 38167204 38175965 PCT
Gso5g2119 5 44106060 44117812 Gso9g1396 9 37906497 37915285 PCT
Gso16g1757 16 38167204 38175965 Gso5g2119 5 44106060 44117812 PCT
Gso9g1396 9 37906497 37915285 Gso5g2119 5 44106060 44117812 PCT