Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2110 ATGTGGCAAGTTCCTTCCTTTGTGAAGAGCCATGCCATGCCGGGGATTGTTCTCCTTGTCTGTGGTCATTGTCCACCTTGTCTTCAAACTATATTTACTGATTTGACATGCTCTTGTGGCACACCGCCTCCCTCATGTCAGCTTCCATGTTCAGTTCCTCAGCCTTGTTCGCATCCGGCCTCTCACAGCTGCCTTTTTCGAGATTGCCCTCCTTGTTCAGTGCCTGTAGCAAAAGAATGTATTGGTGGGCATGTAGTTCTTAGGAACATACCTTGTGGTTCGAAGGATATTAGATGCAATAAACTCTGTGTGAAGACCAGACAGTGCGGTTTACATGCATGTGGCAGAACATGTCACCTCCCACCTTGTGATAATCTATCTGTTGTGACATGTGGTGCTCCTAGGAGAGACTGCCGGCATACATGTATAGCTCCTTGTCACCCTTCAACTCCAAGTCCAGATACAAGATGCGAATTCCCCGTCACAATTACTTGTTCTTGTGGCCGAATAACAGAAAATGTTCCTTGTGATGCTGGTGCTAATTATAATGCTGATGTGGTACATGAAGCTTCCATTATTCAAAAGTTGCCTGTGCTTCTTCAACCTGTGGCTGCAAATGGCAAAAAAGCTCCCCTTAGACAAAGAAAACTGATGTGTAATGATGACTGTGCTAAGTTAGAGCGTAAAAGGGTTCTTGCAGATGCTTATGAGATTACCGCTCCAAATCTGGATTCTCTCCATTTTGGTGAGAATTCGATTGCTTCTGAATTGCTTGCTGACATGTTGAGAAGTGATTCTAAATGGGTTTTATCTGTTGAGGAGAGATGCAAGTTTTTAGTACTTGGCAAGAGCAGAGGAAATGATGCACATGGTCCAAAAGTCCAAGTTTTCTGTCCTATGTTAAAGGACAAAGGAGATGCAGTAAGGGTGATTGCTGAGAGATGGAAGCTTGTAGTGAATGCAGCTGGTCGGGAGCCAAAGCATTTCATAGTTGTTCATGTTACCCCAAAATCAAGAGCTCCTGCTCGTGTGCTAGGGGTTAAGGGTACTACCACTGTAAATGTGCCCCTTCCTCTTGCATTTGATCCTTTGGTTGATATGGATCCTCGAGTTGTTGTCTCTTTTCTAGACTTACCAAGGGATGCAGATATTAGTGCATTGGTGTTGAGATTTGGTGGTAAGTGTGAACTTGTTTGGTTAAATGACAAAAATGCGTTGGCCGTTTTTAATGACCCTGCCCGTGCTGCAACTGCAATGAGGAGGTTTGATCACGGCACTGTTTATAAGGGAGCTGTGATGGTGGTTGTTCCACCAAATGTCGGGGCATCAGTAGCATCTTCAGCTACCAATGCCTGA 1356 0.4469 MWQVPSFVKSHAMPGIVLLVCGHCPPCLQTIFTDLTCSCGTPPPSCQLPCSVPQPCSHPASHSCLFRDCPPCSVPVAKECIGGHVVLRNIPCGSKDIRCNKLCVKTRQCGLHACGRTCHLPPCDNLSVVTCGAPRRDCRHTCIAPCHPSTPSPDTRCEFPVTITCSCGRITENVPCDAGANYNADVVHEASIIQKLPVLLQPVAANGKKAPLRQRKLMCNDDCAKLERKRVLADAYEITAPNLDSLHFGENSIASELLADMLRSDSKWVLSVEERCKFLVLGKSRGNDAHGPKVQVFCPMLKDKGDAVRVIAERWKLVVNAAGREPKHFIVVHVTPKSRAPARVLGVKGTTTVNVPLPLAFDPLVDMDPRVVVSFLDLPRDADISALVLRFGGKCELVWLNDKNALAVFNDPARAATAMRRFDHGTVYKGAVMVVVPPNVGASVASSATNA* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2110 451 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 21 451 IPR034078 GO:0003700
Gso5g2110 451 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 21 451 - -
Gso5g2110 451 SMART znfxneu3 56 74 IPR000967 GO:0005634|GO:0008270
Gso5g2110 451 SMART znfxneu3 109 133 IPR000967 GO:0005634|GO:0008270
Gso5g2110 451 SMART znfxneu3 138 167 IPR000967 GO:0005634|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2110 Gso-Chr5 44022871 44024391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2110 K12236 - gmx:121174871 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2110 5 44022871 44024391 Gso8g0470 8 4336444 4340852 GST