Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2106 ATGGCGAGGCCAGAAAGGACAGGTAGAAATAAAAGTTTAGAGACTCTAATAGACTCGGACAAACCAGGAATGGGAAGAAATGTGAACCAACTGAAGACTCAGAAGTCCATTCCAGGCTATGGCCTTGAATTCAGTAACCTCTCGTATAGTATCATAAAGAAGCAGAAAAACGATGGAGTTTGGATCAACAAAGAAACATATCTTCTTCATGATATCTCTGGCCAGGCAATAAAAGGTGAAATTATGGCAATCATGGGACCTAGTGGTGCTGGCAAGTCCACCTTTCTTGATGCATTGGCCGGGCGAATTGCAAAAGGGAGTCTAGAAGGATCAGTTAGAATTGATGGAAAACCAGTTACTACAAGCTACATGAAAATGGTGTCATCATATGTGATGCAAGATGACCAGCTCTTCCCTATGTTGACAGTCTTTGAAACATTTATGTTTGCGGCTGAAGTTAGGCTTCCTCCTTCCATTTCCAGGAGTGAAAAGAAGAAGAGGGTTTATGAGCTCCTTGACCAATTGGGCTTACAGAGTGCTACACATACCTATATTGGTGACGAAGGAAGGAGAGGAGTGTCAGGAGGGGAACGACGAAGGGTATCTATTGGCATAGACATCATTCATAAACCATCACTTCTGTTCCTTGACGAACCTACCTCAGGCCTTGATTCTACAAGTGCTTACAGTGTTGTAGAAAAGGTTAAAGACATAGCTCGAGGAGGAAGCATTGTCCTTATGACCATACACCAGCCTTCATTTAGAATTCAAATGCTCCTGGACCAGATCACTGTCCTTGCAAGGGGAAGACTGATATACATGGGAAGGCCAGATGCAGTTCAGGCTCACATGTCAAGATTTGGTAGGCCTGTACCTGATGGAGAAAACAGTATTGAGTATCTTCTAGATGTTATAAGTGAATATGATCAAGCAACGGTTGGGCTTGATCCCCTTGTCCAATTCCAACGTGATGGCCTCAAACCTGACCCAGCAGCCATGACACCTGTTCCTAGAACTCCAAGAACACCTTACAAAAGGAACACTCCTGCATCTAAACACATGATTAGCCTACGCAGCCAAGGATTTACTGCTGGAACACAACAGCCTGATTCTGTGCCGTTTAGTTATCATGGTGAGGATGATGATGATGAGGATTTTGATAACTCCCTTGAAAGGAAAAGTGCTCCAACACCAAGGAATATGATTAGTGGTGTTCACCCACGTTTGGCTTCTCAGTTCTACAAAGATTTCTCAGCCAAGGATTTCTCTGTCTGGCTTTACCATGGTGTAGTAGGAACCCCGCATCGCCAACCATCATGGACTCCCGCAAGAACTCCAGGATGGACAACTGGGAAAACACCCATGTCAGGACCAAGAAGTGCAGTTTCAAACCAATATTCTGCGGCTCCTGCAGTGGTTGGCCAGTCTATGGACTACTCAGCAACTTCATATGAAGGATTTGAGATTGAGGAAGTGCTTGATGAGCTAAACTTCGGATCCAAGTATGCAAACCCATGGTTGCGTGAGGTTGCAGTGCTCTCATGGCGAACAGCACTCAATGTAATTCGCACCCCAGAACTCTTCCTCTCCCGTGAGATTGTCTTAACTGTTATGGCACTTATCCTGTCCAACATTTTTCGAAATCTGAGTCATCCTTTATTCAAAGACATCAATAGGCTCCTCAATTTCTACATCTTTGCAGTGTGCCTTGTTTTCTTTTCTTCCAATGATGCAGTCCCTTCTTTTATCATGGAGAGGTTCATCTTCATAAGGGAGACTTCACATAATGCTTACCGTGCTTCTTCATATGTCATTTCTTCCCTCATTGTTTACCTCCCATTTTTTGCTGTTCAAGGTTTCACATTTGCTGTCATAACCAAAAAGATGCTCCACTTGAGAAGCAGTCTCTTGTATTTCTGGCTAATACTTTATGCCTCGCTTATTACTACCAATGCATATGTGATGCTTGTTAGTGCACTTGTGCCTAGTTACATCACAGGGTATGCAGTGGTCATAGCCACAACAGCACTCTTCTTTTTGACCTGTGGTTTCTTCCTCAAGCGAACTCATATACCCATTTACTGGAGGTGGCTTCACTATATTTCTGCAATCAAATATCCATTTGAGGCATTGCTCACAAATGAATTCAATAACCTCAACTGCTACACAGGAAATTTAACAGACTTATCTCCGGGACCATTAGGAGACCTGAAGCTCAGCAAACACCATAACTCCAGTCTGCCCGCTAACTGCTTATTAGGGGAAGATATCTTGTCCTCGATGGATATTACAATGGACAACATATGGTATGACATCTTAATCCTGCTAGCTTGGGGTGTTCTTTGTAGATTCTTCTTCTATTTAGTTTTGAGATTTTACTCTAAGAATGAGAGGAAATGA 2400 0.4308 MARPERTGRNKSLETLIDSDKPGMGRNVNQLKTQKSIPGYGLEFSNLSYSIIKKQKNDGVWINKETYLLHDISGQAIKGEIMAIMGPSGAGKSTFLDALAGRIAKGSLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRSEKKKRVYELLDQLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARGGSIVLMTIHQPSFRIQMLLDQITVLARGRLIYMGRPDAVQAHMSRFGRPVPDGENSIEYLLDVISEYDQATVGLDPLVQFQRDGLKPDPAAMTPVPRTPRTPYKRNTPASKHMISLRSQGFTAGTQQPDSVPFSYHGEDDDDEDFDNSLERKSAPTPRNMISGVHPRLASQFYKDFSAKDFSVWLYHGVVGTPHRQPSWTPARTPGWTTGKTPMSGPRSAVSNQYSAAPAVVGQSMDYSATSYEGFEIEEVLDELNFGSKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLTVMALILSNIFRNLSHPLFKDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGFTFAVITKKMLHLRSSLLYFWLILYASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTHIPIYWRWLHYISAIKYPFEALLTNEFNNLNCYTGNLTDLSPGPLGDLKLSKHHNSSLPANCLLGEDILSSMDITMDNIWYDILILLAWGVLCRFFFYLVLRFYSKNERK* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2106 799 MobiDBLite consensus disorder prediction 362 403 - -
Gso5g2106 799 MobiDBLite consensus disorder prediction 1 16 - -
Gso5g2106 799 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524
Gso5g2106 799 SMART AAA_5 78 278 IPR003593 -
Gso5g2106 799 MobiDBLite consensus disorder prediction 436 461 - -
Gso5g2106 799 CDD ABCG_EPDR 42 275 - -
Gso5g2106 799 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 42 293 IPR003439 GO:0005524
Gso5g2106 799 Pfam ABC-2 type transporter 510 716 IPR013525 GO:0016020|GO:0140359
Gso5g2106 799 PANTHER ABC TRANSPORTER 3 793 - -
Gso5g2106 799 Gene3D - 42 288 IPR027417 -
Gso5g2106 799 MobiDBLite consensus disorder prediction 1 27 - -
Gso5g2106 799 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 793 - -
Gso5g2106 799 MobiDBLite consensus disorder prediction 438 461 - -
Gso5g2106 799 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 286 IPR027417 -
Gso5g2106 799 Pfam ABC transporter 69 221 IPR003439 GO:0005524
Gso5g2106 799 MobiDBLite consensus disorder prediction 324 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2106 Gso-Chr5 43993270 43996315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g2106 21 400 Calmodulin-binding Proteins AT2G36910 22.193 1.45e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2106 K05681 - gmx:100819497 1586.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2106 5 43993270 43996315 Gso8g0466 8 4302980 4306082 GST