Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2098 ATGGTCAAATCAACATATGAAAGATTTTCAAAGGATTTTGTAATGGGAGGAGTAGCAGCAATCATATCAAGGAGTGCAGCGGCACCAATTGAGAGAGTGAAGCTTTTATTGCAAAACCAAGGTGAAATGATTAAAAGAGGACAACTCAAAAAACCATACTTGGGTGTGTCTGATGGCTTTAAGAGGGTCTTCATGGAAGAGGGTTTGATTGCCTTTTGGAGAGGTCACCAGGCCAATCTTATTCGATATTTCCCCACACAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGGTATTCCAAAGAGAGAGACGGGTACATTAAGTGGTTTGCTGGGAATGTGGCTTCAGGCAGTGCTGCAGGAGCGACTACTTCACTACTTCTGTATCATTTAGATTATGCACGTACTAGATTGGGCACCGATGCAATAGAGTGCCGTGTTACCGGTCAACGCCAGTTTAAAGGACTAATTGATGTATACCGGAAGACCTTATCAAGTGATGGAATTGCTGGCTTGTACAGGGGATTTGGGATTTCAATATGGGGAATCACCTTGTATCGAGGGATGTACTTTGGGATCTATGACACCATGAAGCCTATTGTTTTGGTTGGGCCTTTTGAGGGGAAGTTTCTCGCTAGTTTCTTCTTAGGTTGGAGCATCACAACTTTTTCAGCGGTTTGTGCATACCCTTTTGACACATTGCGCCGGCGAATGATGCTTACCTCTGGACATCCAAACAAGTACTGTACTGCAATACATGCATTTCAAGAGATTGTTCGACAGGAGGGTTTCCGAGCTCTATTTCGAGGATTTACCGCAAATATGCTTCTAGGCATGGCAGGAGCTGGAGTGCTTGCTGGATACGATCAGCTGAACCGTATCTCATCTAGACACAGTCACTATAATGAGACTAACCAAAGAGTTCTGAAATGA 945 0.4328 MVKSTYERFSKDFVMGGVAAIISRSAAAPIERVKLLLQNQGEMIKRGQLKKPYLGVSDGFKRVFMEEGLIAFWRGHQANLIRYFPTQAFNFAFKGYFKSIFGYSKERDGYIKWFAGNVASGSAAGATTSLLLYHLDYARTRLGTDAIECRVTGQRQFKGLIDVYRKTLSSDGIAGLYRGFGISIWGITLYRGMYFGIYDTMKPIVLVGPFEGKFLASFFLGWSITTFSAVCAYPFDTLRRRMMLTSGHPNKYCTAIHAFQEIVRQEGFRALFRGFTANMLLGMAGAGVLAGYDQLNRISSRHSHYNETNQRVLK* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2098 314 PRINTS Adenine nucleotide translocator signature 9 21 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso5g2098 314 PRINTS Adenine nucleotide translocator signature 53 74 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso5g2098 314 PRINTS Adenine nucleotide translocator signature 86 98 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso5g2098 314 PRINTS Adenine nucleotide translocator signature 112 125 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso5g2098 314 PRINTS Adenine nucleotide translocator signature 217 233 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso5g2098 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 112 204 IPR018108 -
Gso5g2098 314 Gene3D Mitochondrial carrier domain 10 304 IPR023395 -
Gso5g2098 314 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 4 310 - -
Gso5g2098 314 SUPERFAMILY Mitochondrial carrier 8 295 IPR023395 -
Gso5g2098 314 Pfam Mitochondrial carrier protein 9 102 IPR018108 -
Gso5g2098 314 Pfam Mitochondrial carrier protein 213 298 IPR018108 -
Gso5g2098 314 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Gso5g2098 314 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 4 310 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Gso5g2098 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 7 100 IPR018108 -
Gso5g2098 314 PRINTS Mitochondrial carrier protein signature 12 25 IPR002067 GO:0055085
Gso5g2098 314 PRINTS Mitochondrial carrier protein signature 25 39 IPR002067 GO:0055085
Gso5g2098 314 PRINTS Mitochondrial carrier protein signature 75 95 IPR002067 GO:0055085
Gso5g2098 314 PRINTS Mitochondrial carrier protein signature 127 145 IPR002067 GO:0055085
Gso5g2098 314 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Gso5g2098 314 PRINTS Mitochondrial carrier protein signature 221 243 IPR002067 GO:0055085
Gso5g2098 314 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 298 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2098 Gso-Chr5 43925445 43929284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g2098 7 302 Antiporters AT5G17400 77.027 1.96e-165 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2098 K05863 - gmx:100776735 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2098 5 43925445 43929284 Gso8g0453 8 4211305 4214753 GST