Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2085 ATGGGTGGTGGAGGAACACTCGTGGAAGGGATTCGACGCTTGTTTCAACGACGCGCTTCTTCTTCTTCTTCTTCTGACCATCACGACCACAACAATGTCAATGCCAATAATAGTCTCGTCTTAGTGAGAGATTTGCGCGCGCAATTGGCTTCAATTCCAAACACGCTTCACCCCGATTCCGATTCCGATTTCGATTTCGATTTCTCTACCTTGAAGCCCATCAAAGTTCCCTCACAAATCCCCTTCAGACCCTCTTCCATGGATCATCACAAAAAGGGTGCACCAGAGACAGAGTTTTTTACCGAGTATGGAGAGGCAAGTCAATATCAGATCCAAGAGGTTGTTGGAAAAGGAAGTTATGGTGTTGTGGGTTCTGCCATTGATACTCACACAGGTGAAAAGGTTGCAATCAAGAAAATCAATGATGTTTTTGAGCATGTATCTGATGCCACGCGGATCCTTAGAGAAATTAAGCTCTTGCGGTTGCTTAGGCATCCTGATATCGTGGAAATTAAGCATATTATGCTTCCTCCTTCACGGAGAGAGTTCAGGGATATCTATGTTGTGTTTGAGTTGATGGAATCTGACCTCCATCAAGTAATCAAGGCAAATGACGATCTTACTCCTGAGCACCATCAGTTTTTCTTGTACCAACTTCTTAGGGGCCTGAAATATATACATACAGCAAATGTGTTTCATCGTGATTTGAAGCCAAAAAACATTCTTGCTAACGCTGATTGCAAACTAAAAATATGTGATTTTGGGCTTGCTCGAGTTTCATTTAATGATGCTCCATCAGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTACCGTGCACCTGAATTATGTGGTTCTTTTTTCTCAAAATACACCCCTGCAATTGATATTTGGAGCATTGGGTGCATATTTGCAGAAATGCTCACTGGGAAGCCATTGTTTCCTGGGAAAAATGTTGTGCACCAATTGGATCTCATGACTGATTTGCTTGGGACTCCTCCTCCTGAGTCCATTGCAAGGATTCGAAATGAAAAGGCTAAAAGGTATCTTAATAGCATGAGGAAAAAACAACCAATTCCATTCTCCCAAAAATTTCCAAATGCAGATCCATTGGCTCTTCGTTTGCTGGAGCGCCTACTTGCATTTGATCCAAAAGATCGTCCATCAGCTGAAGAGGCATTATCTGATCCTTACTTCACTGGCTTGGCGAACATGGACCGTGAACCATCCACTCAACCCATTTCAAAACTTGAGTTTGAATTTGAGAGAAGGAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCCCAGATGCTCCAGGAGTATCTTCGTGGTGGAGATCAAACTAGCTTCATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCATTATGGCAAAGGTGAACGAAGCACTCCACCATTGCAGAGACAGCATGCCTCCTTACCTAGAGAGCGAGTTTGTGCTCCCAAGGATGAAAGTAAACAAAACAACGATTCTGAAAAGCCAAGTGGATCAAATCTTCAGCAGAGTCCTCCAGGTTCTGATGAGACAGGTGCTCAAAATGGAACCTCCAAACCAAACTACAGTGCACGTAGCTTGTTGAAGAGTGCCAGCATTAGTGCTTCCAAGTGTGTAGTTTTGAAACAAAATAAAGATCCAGAGCAAGAGCCAATTACGGAGGTAAATGATGAGGCAGTGGATGGAGTGACAGGTGAGATTGCTGCCCTCCATGCTTGA 1785 0.4342 MGGGGTLVEGIRRLFQRRASSSSSSDHHDHNNVNANNSLVLVRDLRAQLASIPNTLHPDSDSDFDFDFSTLKPIKVPSQIPFRPSSMDHHKKGAPETEFFTEYGEASQYQIQEVVGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDLLGTPPPESIARIRNEKAKRYLNSMRKKQPIPFSQKFPNADPLALRLLERLLAFDPKDRPSAEEALSDPYFTGLANMDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPPLQRQHASLPRERVCAPKDESKQNNDSEKPSGSNLQQSPPGSDETGAQNGTSKPNYSARSLLKSASISASKCVVLKQNKDPEQEPITEVNDEAVDGVTGEIAALHA* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2085 594 ProSiteProfiles Protein kinase domain profile. 109 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g2085 594 SMART serkin_6 109 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g2085 594 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 75 533 - -
Gso5g2085 594 CDD STKc_TDY_MAPK 108 445 - -
Gso5g2085 594 Pfam Protein kinase domain 109 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g2085 594 MobiDBLite consensus disorder prediction 479 549 - -
Gso5g2085 594 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 75 533 - -
Gso5g2085 594 MobiDBLite consensus disorder prediction 499 514 - -
Gso5g2085 594 SUPERFAMILY Protein kinase-like (PK-like) 105 405 IPR011009 -
Gso5g2085 594 MobiDBLite consensus disorder prediction 515 549 - -
Gso5g2085 594 Gene3D Phosphorylase Kinase; domain 1 125 446 - -
Gso5g2085 594 ProSitePatterns MAP kinase signature. 144 247 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gso5g2085 594 Gene3D Transferase(Phosphotransferase) domain 1 195 423 - -
Gso5g2085 594 ProSitePatterns Protein kinases ATP-binding region signature. 115 139 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2085 Gso-Chr5 43807598 43812430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g2085 1 593 MAP Kinase Gene Family AT1G73670 71.096 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gso5g2085 Pkinase 8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2085 - - gmx:100780831 1133.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2085 5 43807598 43812430 Gso8g0440 8 4101357 4106047 GST