Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2058 ATGGCGGTGATTTTTTCAAGTGCAATACCAGGAGGGGCAGCACCAGCAGCAATCGAGCAAGTGCAGTGCTTCGGGCGGAAGAAGACGGCGGTGGCAGTGACCTACTGCAAGCGCGGCCGAGGCCTCATTAAGATCAACGGCTGCCCGATCGAGCTGGTGGAGCCGGAGATCCTCCGCTTCAAGGCCTTCGAGCCAATCCTCCTCCTCGGTCGCCACCGCTTCGCCGGCGTGGACATGCGCATCCGCGTGAAGGGCGGCGGTCACACCTCCCAGATATACGCCATCAGGCAGAGCATAGCCAAGGCTCTCGTCGCTTACTACCAGAAGTACGTCGACGAGCAGTCCAAGAAGGAGATCAAGGACATCCTCGTCAGGTACGACCGCACCCTCCTCGTCGCCGATCCCCGCCGCTGCGAGCCCAAGAAGTTCGGTGGTCGCGGTGCTCGCGCCAGGTTTCAGAAGTCCTACCGTTGA 474 0.6139 MAVIFSSAIPGGAAPAAIEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2058 157 PANTHER RIBOSOMAL PROTEIN S9 14 157 IPR000754 GO:0003735|GO:0005840|GO:0006412
Gso5g2058 157 PANTHER - 14 157 - -
Gso5g2058 157 Pfam Ribosomal protein S9/S16 25 157 IPR000754 GO:0003735|GO:0005840|GO:0006412
Gso5g2058 157 ProSitePatterns Ribosomal protein S9 signature. 85 103 IPR020574 GO:0003735|GO:0005840|GO:0006412
Gso5g2058 157 Gene3D - 13 157 IPR014721 -
Gso5g2058 157 SUPERFAMILY Ribosomal protein S5 domain 2-like 20 157 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2058 Gso-Chr5 43548129 43548839 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g2058 13 157 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 88.276 7.12e-94 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2058 K02960 - gmx:100527911 307.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2058 5 43548129 43548839 Gso8g0411 8 3800573 3801275 GST