Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2056 ATGGGGGGGCAGAATCTTTCCCCAAAGGAAAGGAGTAGAGATTGGATTGGAGTTCTTATGAACAGCAGCTTTGGTTATTGTACTTATCACCATGATCTTCGATCTAATGAGATGAATGTGTTCTGCGTGGACTGTGCACTTAGGATGTGTAGGCACTGTAAGGAAGCTCATTCCCTACATAGAAGGTTTCAGATTTACAAATATTCCTACCAGGATGTCTTCCGCCATGCCGAGCTGCAGAAGTATTTTGATTGCTCCAAAATTCAGACTTACATATCCAATAATGAAAGGATTGTGCATCTCAAACCTCGGCCTTCAATCACCAAATCTAAGTCTGCTGATCTAAGTCCCGACTCTAAATACAAAGAGACCGGCATAGCAACAAGACCAAAGTCAGGGGGCACGTGTGAAGAATGTGGAAAACACTTACAAGATGAGCGTAATCGCTTCTGCTCCATTACATGCAAGATCTCAGTGCATCCAGTGGAGACCCAATACCAAGGTCAAAATCAATGTTCACCAAACCACCAAAGTGCTAGAGGCATCATCAATCCAAAACCTGAAGGCATTGACTTTACAATGAATGATAACCATAATTCAGAACCGGAGTCATCTATCTCTGAAGCTGAGCCATATGGGTGGGTTGAAGTTGTGAATTTCAGAAAGCGTCCAAGGAAAAGTATCCCTCAGAGGCCTGTCTTTGTTTTCACGTCTTAG 717 0.431 MGGQNLSPKERSRDWIGVLMNSSFGYCTYHHDLRSNEMNVFCVDCALRMCRHCKEAHSLHRRFQIYKYSYQDVFRHAELQKYFDCSKIQTYISNNERIVHLKPRPSITKSKSADLSPDSKYKETGIATRPKSGGTCEECGKHLQDERNRFCSITCKISVHPVETQYQGQNQCSPNHQSARGIINPKPEGIDFTMNDNHNSEPESSISEAEPYGWVEVVNFRKRPRKSIPQRPVFVFTS* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2056 238 MobiDBLite consensus disorder prediction 107 126 - -
Gso5g2056 238 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 232 - -
Gso5g2056 238 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 2 232 - -
Gso5g2056 238 SMART bboxneu5 22 65 IPR000315 GO:0008270
Gso5g2056 238 SUPERFAMILY B-box zinc-binding domain 17 66 - -
Gso5g2056 238 Pfam PLATZ transcription factor 67 157 IPR006734 -
Gso5g2056 238 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2056 Gso-Chr5 43534277 43536365 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gso5g2056 PLATZ 5.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2056 - - gmx:100809868 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2056 5 43534277 43536365 Gso8g0409 8 3784083 3786166 GST