Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2052 ATGGCTGCCACCGAACACAGACTAAGCTTGGAACCTGAGAAAAAGAACCTTCTCAGACACCACACCGAGAAGCACTTCACAGCCGGCGAAATCGTCCGCGACATCATCATCGGCGTTTCCGACGGCCTCACCGTCCCCTTCGCCCTCGCTGCCGGACTCTCCGGTGCCAATGCCACCTCCTCCATTGTTCTCACCGCCGGCATAGCCGAAGTTGCCGCCGGCGCCATCTCCATGGGTCTCGGCGGTTATTTGGCAGCAAAAAGTGAAACTGATCACTACGCCAGAGAGTTGAAAAGAGAGCAAGAAGAAATCATCGCCGTGCCAGATACTGAAGCGGCAGAGGTAGCAGAAACACTGGCTCAGTACGGAATAGAGGCACATGAATATGCACCTGTGGTGAATGCTCTCAGAAAAAACCCTCAAGCATGGCTTGATTTTATGATGAAATTTGAGCTGGGACTAGAGAAGCCAGATCCAAGGAGAGCATTGCATAGTGCAATGACGATTGCCATTGCTTACATATTAGGTGGGGTTGTTCCTCTCGTTCCTTACATGTTCATTCAAAAGGCAGCAGAGGCAGTTGTGTTTTCAGTTGTGGTTACCTTGGTTGCATTGCTGATTTTTGGCTATGCAAAGGGGCACTTCACGGGCAATAAACCATTCAGGAGTGCTTTGGAAACAGCTCTAATTGGTGCCATCGCCTCTGCAGCTGCTTTTGGTTTGGCAAAGGCTTTCAATCCATAG 744 0.5054 MAATEHRLSLEPEKKNLLRHHTEKHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKSETDHYARELKREQEEIIAVPDTEAAEVAETLAQYGIEAHEYAPVVNALRKNPQAWLDFMMKFELGLEKPDPRRALHSAMTIAIAYILGGVVPLVPYMFIQKAAEAVVFSVVVTLVALLIFGYAKGHFTGNKPFRSALETALIGAIASAAAFGLAKAFNP* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2052 247 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 9 245 IPR008217 GO:0005384|GO:0030026
Gso5g2052 247 Pfam VIT family 32 242 IPR008217 GO:0005384|GO:0030026
Gso5g2052 247 CDD CCC1 11 245 - -
Gso5g2052 247 PANTHER VACUOLAR IRON TRANSPORTER 1.1-LIKE 9 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2052 Gso-Chr5 43498515 43501188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g2052 1 243 Nodulin-like Gene Family AT3G43660 24.898 1.31e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2052 K22736 - gmx:100793585 432.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g2052 5 43498515 43501188 Gso8g0405 8 3757086 3759449 GST