Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2033 ATGTACACATCAAGGAAGAAAATCCACAAGGATAAGGATGCTGAACCAACTGAATTTGAAGAGTCAGTTGGACAGGCATTGTTTGATCTGGAAAATACCAATCAGGAGCTTAAAAGTGATCTGAAGGATTTATACATAAACTCAGCCGTGCAAGTTGATGTTTCTGGAAACCGCAAGGCTGTTGTTATTCATGTCCCTTACAGATTAAGGAAAGGTTTCCGTAAGATTCATGTTAGGCTTGTCAGGGAGCTTGAGAAGAAGTTTAGTGGCAAGGATGTAATCTTGGTTGCCACCCGGAGGATTTTGAGGCCACCGAAGAAGGGTTCTGCTGCTCAGCGTCCTCGCAGCCGCACTCTTACTGCTGTTCATGAAGCAATGCTGGAGGATGTTGTATTGCCTGCTGAGATTGTTGGGAAGCGTGTGAGGTACCAAATTGATGGATCCAAGATTATGAAGGTTTACTTGGACCCAAAGGAGCGAAACAACACTGAGTACAAGTTGGAGACTTTTGCTGCAGTGTACAGGAAGTTATCTGGAAAAGATGTTGTGTTTGAGTATCCTGTCTCAGAGTCTTAG 576 0.4392 MYTSRKKIHKDKDAEPTEFEESVGQALFDLENTNQELKSDLKDLYINSAVQVDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVILVATRRILRPPKKGSAAQRPRSRTLTAVHEAMLEDVVLPAEIVGKRVRYQIDGSKIMKVYLDPKERNNTEYKLETFAAVYRKLSGKDVVFEYPVSES* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2033 191 Coils Coil 27 47 - -
Gso5g2033 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso5g2033 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso5g2033 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Gso5g2033 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2033 Gso-Chr5 43353618 43355639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g2033 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.581 1.95e-113 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2033 K02993 - gmx:100499772 374.4