Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2025 ATGGCTGCGAAACGGTTTTTTGATGATTCTGATCAAGACAATAATAAGCCACCAGGCGATAAACGGATGAGAACTACACCAAGACCTTCTTTTGCTTCGGTAATAGGAGAAGTGGTGATGGTGAAAAACTTGCAGAACCTTTTCTCAGGCTTGGAGCCCTTGCTTAGAAGAGTGGTGAATGAAGAGGTGGAGCGAGTGATGAGGCATTGTACTGTGCCACGTACAATAAGTAGGTCCCCTTCGTTGAGGATCGAAGCAGCATCATTGGAGAAACCATCGAACTATGAACTCATGTTCAGCAAGAAGCTATTGGTCCCTATATTCACAGGAAGCAGAATAGTGGACATAGATGGGAACCCAATCCAGGTGATTCTGGTTGACAAAAGTGGCGGTGATGGTGAATTAGTAGCGGTTCCCACGAGTGTGCCCCAGCCCATAAAGCTAGAGATAGTGGTGCTTGATGGAGATTTTCCTAACAACAAGGAATCATGGACGACTGAGGAGTTCAACAACAACATAGTGAAGGAGAGAACGGGGAAGAGGCCATTGCTCACAGGAGAATTGAATCTGACCATGAGGGATGGGATTGCACCAATTGAAGAGATTGAGTTCACTGATAACTCTAGTTGGATACGAAGCAGGAAGTTCAGAGTTGCTGTTAGGGTGGCTCCAGGGAGTAATCACACTCTCCCAATTCGTCAAGGAATGACTGAGCCATTTGTTGTTAAGGATCACCGTGGTGAATTGTACAAGAAACATTACCCACCTAAGCTCAATGACGAAGTGTGGCGCCTAGAGAAGATTGGTAAAGACGGAGCTTTCCACAAAAAATTGTCCAAAGAGGGGATAAACAGCGTCCAAGACTTTCTCAAGTTATCCGTTGTTGATGTCCATAGGCTCAGAAAGATTTTGGGCGTTGGGATGTCAGAAAAAATGTGGGAAGTGACAATGAAGCATGCAAAGACTTGCGAGAAGGGCAACAAGTACTACGTGTACCGTGGGCCTAATTTTAGCGTCTTTCTGAATTCCATATGCCAGCTGGTTAGAGCTGATATCAACGGCCAAAGTTTTCCGAGTAGAGAGCGAAGCAACATGACCAGGAGCTATATGGAGAAATTGGTGAGAGAAGCATATGTTAGATGGAATGACTTGGAGGAAATTGATGCGGCTTTCTTAACCCAAGGTGAAACTTTGGAGCAATTTCCAAACAATCATCAAGCATCACTAATAGCATATGATCAGAACGACTATTTTGGTGATAAATCTGCCGAAGTTGGTAACTATGTACCAACCCATAATGCACAAATTGGATGCAGCGAGTGGGCAGTGAATGGAACATTTGGCACAACATCATTTGTGAATGGCATACCTTACAGCTTCTTAGATTCACAATCGGACAGTGACATAAGCCCCTCAGTTGATGGTGCCGCAAGGTGGCCTTAG 1443 0.4477 MAAKRFFDDSDQDNNKPPGDKRMRTTPRPSFASVIGEVVMVKNLQNLFSGLEPLLRRVVNEEVERVMRHCTVPRTISRSPSLRIEAASLEKPSNYELMFSKKLLVPIFTGSRIVDIDGNPIQVILVDKSGGDGELVAVPTSVPQPIKLEIVVLDGDFPNNKESWTTEEFNNNIVKERTGKRPLLTGELNLTMRDGIAPIEEIEFTDNSSWIRSRKFRVAVRVAPGSNHTLPIRQGMTEPFVVKDHRGELYKKHYPPKLNDEVWRLEKIGKDGAFHKKLSKEGINSVQDFLKLSVVDVHRLRKILGVGMSEKMWEVTMKHAKTCEKGNKYYVYRGPNFSVFLNSICQLVRADINGQSFPSRERSNMTRSYMEKLVREAYVRWNDLEEIDAAFLTQGETLEQFPNNHQASLIAYDQNDYFGDKSAEVGNYVPTHNAQIGCSEWAVNGTFGTTSFVNGIPYSFLDSQSDSDISPSVDGAARWP* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2025 480 Pfam Calmodulin binding protein C-terminal domain 328 387 IPR046829 -
Gso5g2025 480 PANTHER OS02G0177800 PROTEIN 1 474 IPR012416 GO:0005516
Gso5g2025 480 Pfam Calmodulin binding protein central domain 258 323 IPR046830 -
Gso5g2025 480 MobiDBLite consensus disorder prediction 1 27 - -
Gso5g2025 480 Pfam Calmodulin binding protein-like N-terminal domain 95 245 IPR046831 -
Gso5g2025 480 PANTHER PROTEIN, PUTATIVE-RELATED 1 474 - -
Gso5g2025 480 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2025 Gso-Chr5 43288109 43292494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g2025 3 392 Calmodulin-binding Proteins AT5G57580 47.980 2.67e-111 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2025 - - gmx:100802257 964.526