Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2024 ATGACCAATTCTTTTGAATCCAAACTGAGACCAGGAGGCTATGGTCAAGTATATAAAGGAAATCTAAGCAACAACTCTCCTGTGGCCGTGGCAGTGAAGGTACTGAATGCTTCCAAAGGGAACGGGGAAGAATTTATCAACGAGGTTATAAGCATCAGTAGAAAGTCCCATGTAAATATTGTTAATCTCCTTGGTTTTTGTCTTGAAGGCCAGAAGAAAGCACTTGTCTACGATTACATGCCCAATGGATCCCTTGAAAAGTTTATACACAACAGGAATTTGGAAACCAATCCACCTTTGAGTTGGGAAAGATTACACCGCATTGCTGAAGGGATAGCTAAAGGACTGGAGTACTTGCATAGAGGGTGCAACACTCGGATATTACATTTTGACATAAAACCAAGCAACATCCTTTTGGACAAAAATTTCTGTCCCAAAACCGAAGTGAATATTTGCACCACTACGAGTAGCTGTGATTAA 480 0.4062 MTNSFESKLRPGGYGQVYKGNLSNNSPVAVAVKVLNASKGNGEEFINEVISISRKSHVNIVNLLGFCLEGQKKALVYDYMPNGSLEKFIHNRNLETNPPLSWERLHRIAEGIAKGLEYLHRGCNTRILHFDIKPSNILLDKNFCPKTEVNICTTTSSCD* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2024 159 SUPERFAMILY Protein kinase-like (PK-like) 5 146 IPR011009 -
Gso5g2024 159 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Gso5g2024 159 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Gso5g2024 159 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 147 IPR045874 GO:0004672
Gso5g2024 159 PANTHER - 1 147 - -
Gso5g2024 159 Gene3D Transferase(Phosphotransferase) domain 1 80 153 - -
Gso5g2024 159 Pfam Protein tyrosine and serine/threonine kinase 5 143 IPR001245 GO:0004672|GO:0006468
Gso5g2024 159 SMART serkin_6 3 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g2024 159 ProSiteProfiles Protein kinase domain profile. 3 159 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2024 Gso-Chr5 43284673 43285152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g2024 1 146 Receptor kinase-like Gene Family AT5G38280 61.644 2.17e-55 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gso5g2024 PK_Tyr_Ser-Thr 5.2e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2024 - - gmx:102659630 329.331