Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso5g2024 | ATGACCAATTCTTTTGAATCCAAACTGAGACCAGGAGGCTATGGTCAAGTATATAAAGGAAATCTAAGCAACAACTCTCCTGTGGCCGTGGCAGTGAAGGTACTGAATGCTTCCAAAGGGAACGGGGAAGAATTTATCAACGAGGTTATAAGCATCAGTAGAAAGTCCCATGTAAATATTGTTAATCTCCTTGGTTTTTGTCTTGAAGGCCAGAAGAAAGCACTTGTCTACGATTACATGCCCAATGGATCCCTTGAAAAGTTTATACACAACAGGAATTTGGAAACCAATCCACCTTTGAGTTGGGAAAGATTACACCGCATTGCTGAAGGGATAGCTAAAGGACTGGAGTACTTGCATAGAGGGTGCAACACTCGGATATTACATTTTGACATAAAACCAAGCAACATCCTTTTGGACAAAAATTTCTGTCCCAAAACCGAAGTGAATATTTGCACCACTACGAGTAGCTGTGATTAA | 480 | 0.4062 | MTNSFESKLRPGGYGQVYKGNLSNNSPVAVAVKVLNASKGNGEEFINEVISISRKSHVNIVNLLGFCLEGQKKALVYDYMPNGSLEKFIHNRNLETNPPLSWERLHRIAEGIAKGLEYLHRGCNTRILHFDIKPSNILLDKNFCPKTEVNICTTTSSCD* | 160 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso5g2024 | 159 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 146 | IPR011009 | - | |
Gso5g2024 | 159 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 127 | 139 | IPR008271 | GO:0004672|GO:0006468 | |
Gso5g2024 | 159 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 79 | - | - | |
Gso5g2024 | 159 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 1 | 147 | IPR045874 | GO:0004672 | |
Gso5g2024 | 159 | PANTHER | - | 1 | 147 | - | - | |
Gso5g2024 | 159 | Gene3D | Transferase(Phosphotransferase) domain 1 | 80 | 153 | - | - | |
Gso5g2024 | 159 | Pfam | Protein tyrosine and serine/threonine kinase | 5 | 143 | IPR001245 | GO:0004672|GO:0006468 | |
Gso5g2024 | 159 | SMART | serkin_6 | 3 | 157 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso5g2024 | 159 | ProSiteProfiles | Protein kinase domain profile. | 3 | 159 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso5g2024 | Gso-Chr5 | 43284673 | 43285152 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso5g2024 | 1 | 146 | Receptor kinase-like Gene Family | AT5G38280 | 61.644 | 2.17e-55 | 182 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Gso5g2024 | PK_Tyr_Ser-Thr | 5.2e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso5g2024 | - | - | gmx:102659630 | 329.331 |