Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g2018 ATGAGAACCCAACGGCTTAACCATCTCCTTCTCTCCCTCTTCCTCTTCGCAGCCGCATTCTCCAGCCTCCACCCGACGGCCACCGCCGGAGACGAAGGCGCACCGTCTGCAGGCGACGGCGACCGCGACGCCGATTTCATCCGCACTAGCTGCAACACCACGCTCTACCCGGAAGTGTGTTTCACCTCCCTCTCTCGCTACGCCAATGCGGTGCAGCAGAACCCCGGCCATCTGGCGCGTGTGGCCATTGCCGTAAGTCTCTCGAAGGTTCACCGTGCGGCGTCCTACGTCTCCAACCTCACGCGCGACGCCGACTACGGCGGAAGCACGCGCGCCGCTCTTGCTCTGCACGACTGCTTCTCGAATCTGGGCGACGCCGTGGACGAAATCCGCGGCTCGCTGAAGCAGATGCGGCAGATTGGATCCGCCGGCGCCGGCGCGAGTTCGTTCCTGTTCCAGATGAGCAACGTGCAGACGTGGTTGAGTGCCGCACTCACCGACGAAGAGACCTGTACGGATGGATTCCAGGACGTAGCGGACTGTCCCATGAAAACGGGTGTATGCGATCGCGTCAGCAACGTCAAGAAGTTCACCAGCAATGCCTTGGCGCTCGTCAACTCCTACGCCAACAAGGGAATGCCTTGA 645 0.6171 MRTQRLNHLLLSLFLFAAAFSSLHPTATAGDEGAPSAGDGDRDADFIRTSCNTTLYPEVCFTSLSRYANAVQQNPGHLARVAIAVSLSKVHRAASYVSNLTRDADYGGSTRAALALHDCFSNLGDAVDEIRGSLKQMRQIGSAGAGASSFLFQMSNVQTWLSAALTDEETCTDGFQDVADCPMKTGVCDRVSNVKKFTSNALALVNSYANKGMP* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g2018 214 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 211 - -
Gso5g2018 214 Pfam Plant invertase/pectin methylesterase inhibitor 45 204 IPR006501 GO:0004857
Gso5g2018 214 CDD PMEI-like_3 49 210 - -
Gso5g2018 214 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 208 IPR035513 -
Gso5g2018 214 SMART PMEI_2 42 204 IPR006501 GO:0004857
Gso5g2018 214 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 8 211 - -
Gso5g2018 214 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 208 IPR035513 -
Gso5g2018 214 TIGRFAM PME_inhib: pectinesterase inhibitor domain 25 208 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g2018 Gso-Chr5 43224862 43225920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g2018 47 207 Carbohydrate Esterase AT3G14310 24.074 3.86e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g2018 - - gmx:100803842 410.609