Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso5g1976 | ATGGCAAGTCGAGTGAAGGAAGATGAGAAAAATGAACGAATAATTCGAGGTCTTCTCAAACTCGCACCAAATCGAAGATGCATTAACTGTAACAGCTTGGGACCACAATATGTGTGCACAAATTTCTGGACGTTTGTTTGCACTAACTGTAGCGGAATACACCGAGAGTTTACACATCGGGTAAAATCAGTTTCAATGGCTAAATTTAGTGCACAGGAAGTTAGTGCACTTCAAGAAGGAGGAAATCAGCGTGCAAAGGAAATCTATTTTAAAGAATGGGATCCACAACGTCATTCTTTGCCTGATAGCAGCAATATTGACAGGCTCCGGGACTTTATTAAGCATGTTTATGTGGATAGAAGATTCAGCGGTGAGAGGACTTATGACAAACCTCCAAGAGTAAAGGGTGACAAGGATGATTTCCATGAAAACAAGAGGACAGAGACTTATCACAGAAGCCCTTCATATGAGGACACACATGAACGTCGTTACAGTGACAGGTCTAGTCCTGGTGGAAGAAGTCCTGTATATGATCAAGAAAATAGGCAATATGGTGATTACAAGAAAAGCCCTGGTCGTCCTCCAATAATCAATGATTGGCGTCGAGAAGATAGATTTGGGGATGGATGGAAATTTGAAGATCATAGAATATCTGATGGAAATCATAATGTGGAAAGTACTTCTCCTGAGCAAACCAAGGATCTGGATTCTTCCAGCCCACCTGCAGTCCGACCTGTTAGAGAGATCTTGGGAGAAAATGTAGTACCTCTTCGAATAAGTGAACCACCCAAAACAAACAGTGGACAGGCTACTAATGGCTCAGCACTCACACAGAGAACTTCATCTTCCAGTAGCTTAGCATCCAGCAATGGAACCCCTGCAGAAGTTAAGCTTGAGACTATTAAGAGCCTTATTGATTTTGATGATGATCCTGAACCACCTGTTGCTTCAGCAATTCCTCAAGCCCCGCAAACTACTGTGGCTAAACATGGGATGCCTGCAAATTCCAATGATAATAATTGGGCCTCTTTTGATGTTGCTCCTGAGGCAAAAGCACCTCAGGGTCCTTCGAATATAAATCCACTTGAATCCATGCTGACACAATTGTCAGTACCAGTATCTTTACCTTCTCATGTTTCAAGAGCCCAAGGACCTTTGACGGGGTCAGCTCTTACCACTACTGCTGCAGGAGCTCCAATTGTTAGCAGCTTCTCAACATTCCCAGCCAGTGGTGCTTCAGTAACATCTTTTGGATTAACAACAGCATCAACTCTCAATAATGCAGGACAGTGGGCTACTTTGCAGTATCAGCAACAGCAACCTTTGCTCACTGCTGCTGCTAGTCAGCCTACTATTCAACAATCCACTCCACCAGTTGGTGGAGCTTTGAATAATCAGCCCTGGACTGTACCTTCTGTACAAGGGCACGCAAACACACCAATGCCTCATGCATCGCACCTTGTCCCAAAGCCTGCCAATGAGGCTAAATCCAGTGTTGTTTTACATCCTTCTACAGTAGACATAAAACCAAGTGGAAGAAGTGAGCTTCCTGAGGATCTATTCACTGTAAAATATTCACCGTTCCCTGCTCCAGTCCCAGGTTGGCAAATGGGTCCACCACCTAGCATGGGTATCTCAATTCAATACAATAATGCAGTGCCCATGCCAAGTTATGCACAACCATCAAAATCAACAAATCCATTTGATGTCAGTAGCGAACCAACTCCAGTTCAAGCCCCAATGTTTCCTTCCATGTCATCTTTGCAAGGTGCTCTGCCTAGTGTAACGCCTTCAGCTACAATGCACCCATCAAACATGGGTAATATATCTCATGCCTGGAATCCACACTCATCATCACCATCTTATGTATTGCCTCCTCAAGCACAAACTCTTGCACCAGCAATGGGACTGGGGGCATACATGGGACAACAAATGGCAACTAACATGCCAATGCCAAGGCATCAAGGAATTGGGAGTTTTGCCACCGAGGCAACTGCTTTTGGATTCTCAAATCCAGATCAACAGCTGACTGGTAGGTTGTCAACTGCTGCTACCCCAAACACCTACCATGCAGGAGGGAACCCTTTCGGATGA | 2094 | 0.4456 | MASRVKEDEKNERIIRGLLKLAPNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSVSMAKFSAQEVSALQEGGNQRAKEIYFKEWDPQRHSLPDSSNIDRLRDFIKHVYVDRRFSGERTYDKPPRVKGDKDDFHENKRTETYHRSPSYEDTHERRYSDRSSPGGRSPVYDQENRQYGDYKKSPGRPPIINDWRREDRFGDGWKFEDHRISDGNHNVESTSPEQTKDLDSSSPPAVRPVREILGENVVPLRISEPPKTNSGQATNGSALTQRTSSSSSLASSNGTPAEVKLETIKSLIDFDDDPEPPVASAIPQAPQTTVAKHGMPANSNDNNWASFDVAPEAKAPQGPSNINPLESMLTQLSVPVSLPSHVSRAQGPLTGSALTTTAAGAPIVSSFSTFPASGASVTSFGLTTASTLNNAGQWATLQYQQQQPLLTAAASQPTIQQSTPPVGGALNNQPWTVPSVQGHANTPMPHASHLVPKPANEAKSSVVLHPSTVDIKPSGRSELPEDLFTVKYSPFPAPVPGWQMGPPPSMGISIQYNNAVPMPSYAQPSKSTNPFDVSSEPTPVQAPMFPSMSSLQGALPSVTPSATMHPSNMGNISHAWNPHSSSPSYVLPPQAQTLAPAMGLGAYMGQQMATNMPMPRHQGIGSFATEATAFGFSNPDQQLTGRLSTAATPNTYHAGGNPFG* | 698 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso5g1976 | 697 | MobiDBLite | consensus disorder prediction | 126 | 168 | - | - | |
Gso5g1976 | 697 | CDD | ArfGap_AGFG | 12 | 122 | - | - | |
Gso5g1976 | 697 | MobiDBLite | consensus disorder prediction | 222 | 238 | - | - | |
Gso5g1976 | 697 | MobiDBLite | consensus disorder prediction | 126 | 294 | - | - | |
Gso5g1976 | 697 | ProSiteProfiles | ARF GTPase-activating proteins domain profile. | 12 | 130 | IPR001164 | GO:0005096 | |
Gso5g1976 | 697 | PANTHER | ARFGAP/RECO-RELATED | 1 | 697 | IPR044820 | GO:0005096 | |
Gso5g1976 | 697 | SMART | arf_gap_3 | 12 | 130 | IPR001164 | GO:0005096 | |
Gso5g1976 | 697 | MobiDBLite | consensus disorder prediction | 195 | 221 | - | - | |
Gso5g1976 | 697 | MobiDBLite | consensus disorder prediction | 260 | 294 | - | - | |
Gso5g1976 | 697 | Pfam | Putative GTPase activating protein for Arf | 13 | 123 | IPR001164 | GO:0005096 | |
Gso5g1976 | 697 | PANTHER | ARF GTPASE ACTIVATOR | 1 | 697 | - | - | |
Gso5g1976 | 697 | PRINTS | HIV Rev interacting protein signature | 24 | 43 | IPR001164 | GO:0005096 | |
Gso5g1976 | 697 | PRINTS | HIV Rev interacting protein signature | 43 | 60 | IPR001164 | GO:0005096 | |
Gso5g1976 | 697 | PRINTS | HIV Rev interacting protein signature | 61 | 82 | IPR001164 | GO:0005096 | |
Gso5g1976 | 697 | Gene3D | Arf GTPase activating protein | 1 | 131 | IPR038508 | - | |
Gso5g1976 | 697 | SUPERFAMILY | ArfGap/RecO-like zinc finger | 11 | 123 | IPR037278 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso5g1976 | Gso-Chr5 | 42877790 | 42885153 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso5g1976 | 12 | 122 | C2H2 Transcription Factor Family | AT4G21160 | 35.043 | 1.72e-12 | 67.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso5g1976 | - | - | gmx:100781002 | 1390.56 |