Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1974 ATGATGATGGTGATGAAGAAGGAAGCAACATACTCCTCCATTCTCACACTCCTCATTGCCACACTCTCCCTAGCCCTCTCCGACGAGTTCGGCGACAGAGGAGAGAATGTCACCGTTGACCCTTCTCTTGTCTTCCAAAATGACCGTCTCAGAAACGCTTATATAGCCTTGCAAGCTTGGAAGCAAGCCATTTTGTCTGATCCCCGCAACCAGACAACCGATTGGGTTGGATCCCAAGTGTGCAGCTACACCGGAGTGTACTGTGCTCCCGCGCTGGACAACCCCAATATCCGTACCGTAGCCGGCATTGATCTCAACCATGGTGACATTGCCGGTTATTTACCCCAAGAGCTCGGTTTGCTGGTGGATCTTGCACTCTTCCACATCAACTCAAATAGATTCTGCGGCACCGTGCCGCACAAGTTCGATAGGTTGAAACTGCTCTACGAACTGGATCTCAGTAACAACAGGTTCGCAGGAAAGTTCCCTGAGGTGGTTCTGCGTCTTCCGTCACTCAAGTTCTTGGATCTCAGGTTCAACGAATTCGAAGGTACGGTGCCGAGAGAGTTGTTCGATAAGGACCTGGACGCCATTTTCATCAACGACAACCGTTTCGTCTTTGATCTTCCGGACAACTTGGGCAACTCGCCGGTCTCCGTCATCGTCCTCGCCAACAACAGATTCCACGGCTGCATTCCGGCCAGCTTGGGGAACATGTCTAACTTGAACGAAATCATCTTGATGAACAATGCATTCCGATCGTGCTTGCCTTCGGAGATTGGGCTTCTGAAGAACCTGACGGTGTTCGACGTCAGCTTTAATCAACTTCTTGGTCCCTTACCGAACGCCGTTGGAAACGCCGTCAGCTTGGAGCAGCTCAATGTGGCGCATAACTTACTCTCAGGTCAAATTCCAGCCAGCATTTGTATGCTGCCTCACCTTCAGAACTTCACTTATTCCTTTAACTTCTTCACTAGTGAGCCTCCCGCATGTCTCGCATTGCCAGCGTTTGACGACAGGCTCAACTGCTTACCGGCAAGGCCGGCGCAGAGGCCTCCGCCGCAATGTAAGTCGTTCTTCTCTAAACCTGTGGACTGTAACTCCTTTAAGTGTAAACCATTTGTTCCTTCACCTACACCTTCACCTGCAACACCGGTAACACCTTCACCTCCATCACCTTCTACACCTTCACCTACTACCCCTGTAACTCCTTCACCTACGACACCTGTAACACCTTCACCTCCTTCCCCTTCAACACCTTCACCGTTTCCTTCACCTACGACACCTGTAACGCCTTCACCTCCTTCGCCATTTCCTTCACCTACGCCACCTGTAACACCTTCACCTCCTTCCCCTTCAACACCTTCACCGTTTCCTTCACCTACGACACCTGTAACGCCTTCACCTCCTTCACCTACAACACCTTCACCATTTCCTTCACCTACGACACCTGTAACACCTTCACCTCCTTCGCCATTTCCTTCACCTACGCCACCTGTAACTCCTTCACCAGTACCTTCACCTCCATCACCTACAACAGTACCACCTGTTCATAGTCCTTCTCCAGGGTATTTGCCACCGCCGCCACATTCTTCCCCTATACCACCTGTGTACCCTCCACAACATTCTCCACCTTCACATACTCCAAAGCCACCTCCATCAAATTCACCATCGCCCCCTTCTCCCCCCCATCACTCACCCGCACAACCTGTTTATCCTTATTTATCACCTCCACCACCACCTTCACCGCCTTGTATAGAACTTCCTCCACCCCCTCCCCAATCTACACCTTCTCCCACACCTTACCTCCCACCACCATCTCCTTCTCCTCCTCCGCCACCAGTGTATGTTTCTCCACCACCACCACCACCAGTTCAATACAGTTCGCCGCCCCCACCGGTATACCATTCACCGCCTCCGTGCGAAACTCCACCTTCAGTTTCTCCGCCCCCACCACCCGCCCCTGTATATGAAGGGCCATTGCCACCTATCGTTGGACTCCCGTACGCGTCGCCCCCACCACCACCCTTTTATTGA 2037 0.5218 MMMVMKKEATYSSILTLLIATLSLALSDEFGDRGENVTVDPSLVFQNDRLRNAYIALQAWKQAILSDPRNQTTDWVGSQVCSYTGVYCAPALDNPNIRTVAGIDLNHGDIAGYLPQELGLLVDLALFHINSNRFCGTVPHKFDRLKLLYELDLSNNRFAGKFPEVVLRLPSLKFLDLRFNEFEGTVPRELFDKDLDAIFINDNRFVFDLPDNLGNSPVSVIVLANNRFHGCIPASLGNMSNLNEIILMNNAFRSCLPSEIGLLKNLTVFDVSFNQLLGPLPNAVGNAVSLEQLNVAHNLLSGQIPASICMLPHLQNFTYSFNFFTSEPPACLALPAFDDRLNCLPARPAQRPPPQCKSFFSKPVDCNSFKCKPFVPSPTPSPATPVTPSPPSPSTPSPTTPVTPSPTTPVTPSPPSPSTPSPFPSPTTPVTPSPPSPFPSPTPPVTPSPPSPSTPSPFPSPTTPVTPSPPSPTTPSPFPSPTTPVTPSPPSPFPSPTPPVTPSPVPSPPSPTTVPPVHSPSPGYLPPPPHSSPIPPVYPPQHSPPSHTPKPPPSNSPSPPSPPHHSPAQPVYPYLSPPPPPSPPCIELPPPPPQSTPSPTPYLPPPSPSPPPPPVYVSPPPPPPVQYSSPPPPVYHSPPPCETPPSVSPPPPPAPVYEGPLPPIVGLPYASPPPPPFY* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1974 678 SUPERFAMILY L domain-like 55 335 - -
Gso5g1974 678 Pfam Leucine rich repeat N-terminal domain 56 88 IPR013210 -
Gso5g1974 678 Gene3D Ribonuclease Inhibitor 52 216 IPR032675 -
Gso5g1974 678 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 24 499 - -
Gso5g1974 678 Gene3D Ribonuclease Inhibitor 217 344 IPR032675 -
Gso5g1974 678 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 5 24 499 - -
Gso5g1974 678 MobiDBLite consensus disorder prediction 377 665 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1974 Gso-Chr5 42858705 42861445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1974 24 371 Trihelix Transcription Factor Family AT4G18670 79.083 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1974 - - gmx:100782090 728.398