Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1973 ATGTTCTTGTCTTTGCATATAGTCCTAATTAATCATATTGCAACATTCCACTTACCGACACCATCTCTACGACAACCTCCTTTCTCTCTATCTCTAGCTCCGATGAGTGCTCTCTCTAACTCCAGTAGTAGCCACGGCAATTCCTTCCTCAAGATGCCCGCCATCAAGTTTACCAAGCTCTTCATCAATGGAGATTTTGTTGATTCCATATCAGGAAGGACATTTGAGACTATAGACCCCAGAAAAGAAGAGGTAATTGCAAGAGTTAGTGAGGGAGATAAAGAAGACATTGATATTGCTGTTAAAGCAGCACGTCAGGCATTTGACTCGGGTCCATGGCCTCGCTTGCCAGGCTCTGAAAGGGCAAAAATTATGATGAAATGGGCAGACCTAGTTGATGAAAATATAGAAGAACTAGCAGCATTAGATACCATTGATGCTGGAAAGCTATACTATATTAATAAGGTAGCGGAAATTCCTTCAGCTACAAATGCGTTACGGTACTATGCAGGTGCTGCTGATAAAATTCACGGTGACGTATTAAAAATGAACGGGGATTTCCATGCTTATACACTTTTGGAACCAATTGGTGTTGTGGGACACATAATTCCATGGAATGCCCCCAGCCTCTCATTTTTCATCAAGGTTAGCCCTTCCTTAGCTGCAGGCTGTACTATGGTCCTCAAACCTGCTGAACAAACACCCCTCTCTGCTTTGTTTTATGCTCATCTAGCTAAGTTGGCTGGAATCCCAGATGGTGTGCTTAATATAGTACCTGGATTTGGCCCAACTGCTGGCGCAGCAATAAGCTCACACATGGACATAGATGCGGTCAGTTTTACTGGTTCAATTGAAGTAGGGCGTGAAGTGTTGCAGGCTGCAGCTTGGAGCAATTTAAAACCGGTTTCACTTGAATTAGGAGGCAAGTCTCCTCTCATTATTTTCAATGATGCGGATATAGACAAAGCTTCCGAGCTTGCTCTCTTTGGCATCATGTCTAACAAGGGAGAAATTTGTGTGGCAGGTTCTCGTGTGTTTGTCCAGGAAGAGATCTATGATGAATTTGAGAAGAAGTTGGTGGAGAAGGCAAAATCTTGGGTCGTTGGGGATCCTTTTGATCCCAAATCGCTGCAAGGGCCTCAGGCTGACAGGAACCAATTGGAGAAAATACTTTCATATATTGAGCACGGAAAGAGAGAAGGAGCCACCCTTTTGACAGGAGGTAATACAGTGGGCAACAAAGGTTACTACATAGAACCTACAATTTTCTCCAATGTAAAGGAGGACATGCTAATAGCACGGGAAGAAATATTTGGCCCTGTACTAGCGCTGATGAAGTTTAAGACCATGGAGGAAGCAATTAAAAGTGCTAACAATACCAAGTATGGCCTAGCAGCAGGAATTGTAACCAAGAATTTGGATACTGCAAACACTATGTCAAGGTCCATTCGTGCAGGCATTGTTTGGATCAACTGCTATTTTACCGTAGGGAGTGATGTTCCTTTTGGAGGGTATAAGATGAGCGGATTTGGAAGAGATTTGGGATTACAGGCCCTTCACAAGTACTTACAAGTTAAATCTGTTGTAACACCTATTCATAATTCTCCTTGGCTTTGA 1617 0.4298 MFLSLHIVLINHIATFHLPTPSLRQPPFSLSLAPMSALSNSSSSHGNSFLKMPAIKFTKLFINGDFVDSISGRTFETIDPRKEEVIARVSEGDKEDIDIAVKAARQAFDSGPWPRLPGSERAKIMMKWADLVDENIEELAALDTIDAGKLYYINKVAEIPSATNALRYYAGAADKIHGDVLKMNGDFHAYTLLEPIGVVGHIIPWNAPSLSFFIKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKLAGIPDGVLNIVPGFGPTAGAAISSHMDIDAVSFTGSIEVGREVLQAAAWSNLKPVSLELGGKSPLIIFNDADIDKASELALFGIMSNKGEICVAGSRVFVQEEIYDEFEKKLVEKAKSWVVGDPFDPKSLQGPQADRNQLEKILSYIEHGKREGATLLTGGNTVGNKGYYIEPTIFSNVKEDMLIAREEIFGPVLALMKFKTMEEAIKSANNTKYGLAAGIVTKNLDTANTMSRSIRAGIVWINCYFTVGSDVPFGGYKMSGFGRDLGLQALHKYLQVKSVVTPIHNSPWL* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1973 538 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 39 538 - -
Gso5g1973 538 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 39 538 - -
Gso5g1973 538 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 304 311 IPR029510 GO:0016491
Gso5g1973 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 62 526 IPR016162 GO:0016491
Gso5g1973 538 SUPERFAMILY ALDH-like 50 533 IPR016161 GO:0016491
Gso5g1973 538 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
Gso5g1973 538 Pfam Aldehyde dehydrogenase family 67 528 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1973 Gso-Chr5 42846343 42851966 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1973 41 538 Aldehyde Dehydrogenase Gene Family AT3G24503 68.337 0.0 723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1973 5 42846343 42851966 Gso8g0331 8 3099919 3104869 GST
Gso5g1973 5 42846343 42851966 Gso7g0755 7 8208932 8215646 PCT
Gso5g1973 5 42846343 42851966 Gso9g1556 9 39846093 39853520 PCT
Gso7g0755 7 8208932 8215646 Gso5g1973 5 42846343 42851966 PCT
Gso9g1556 9 39846093 39853520 Gso5g1973 5 42846343 42851966 PCT