Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1964 ATGGAAAACCAAAACCGTCTCAAACTTCGAATCTCTCGCATGTTCCGATCCTCATTCGGGTCGTGCAGGACTCGTAACCTAACCGATGTAATGGAAAAAGCGGTGTTTGCACCACCCAACCCCATCGAAGTCGAACAACCCTCCCCCAAAACCATCAACAACACTTGCATCCTGTCGTTTAAGGATTCTCTTCCCAGGCGCAAAATCTCGGAGTGGTCATCACCTTTTGTCTTGGGTGGCGGCAGCAAAAACAAAAACAACAACCTCAACCTTAACCTCGGTGTCATGCCGTGCCCACCCACTTCCTCAAACATTTCCCTCAACACAGTCCACGAACAAGATTTCGGTTACGACGACAAAAAGAAGGTTTCAACGAAAAACTCGAGGACCAAGAAGAAGAAGAAGAAGAAGAAGAGACGTGCCCAGAACAAAAGGGAGTTTTTCCCTTTCAATTCATGCGCCAGAGACACCAACTTTGGTGGATACTGGTGGTATAGCAGCGACGAAGATGACGAAACCGACACCCTTTTCTCCTCCAAAAGCCTCTCCTCGGATTCCTCACGCTCCCGGCGCCGATGCCGGCGCCGCGAAAATGACCGGAGCTCCGACATGGGTGTTCTGCCGCTGCACGGGAAGGTGAAGGACACGTTCGCGGTGGTGAAGCGCTCCAGCGACCCTTACAGTGATTTCAGGACTTCGATGCTCGAAATGATAGTCGAGAAGCAGATTTTTTCGCCCGCGGATTTGGAGAATCTCTTGCAGTGTTTTCTGTCGCTGAATTCGCATCACCACCATAAGATCATTGTCCATGTCTTCACCGAGATTTGGGAGGCTCTGTTCTCTGACTGGTTTTGA 855 0.5029 MENQNRLKLRISRMFRSSFGSCRTRNLTDVMEKAVFAPPNPIEVEQPSPKTINNTCILSFKDSLPRRKISEWSSPFVLGGGSKNKNNNLNLNLGVMPCPPTSSNISLNTVHEQDFGYDDKKKVSTKNSRTKKKKKKKKRRAQNKREFFPFNSCARDTNFGGYWWYSSDEDDETDTLFSSKSLSSDSSRSRRRCRRRENDRSSDMGVLPLHGKVKDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPADLENLLQCFLSLNSHHHHKIIVHVFTEIWEALFSDWF* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1964 284 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 282 IPR038933 GO:0045892
Gso5g1964 284 MobiDBLite consensus disorder prediction 126 142 - -
Gso5g1964 284 PANTHER TRANSCRIPTION REPRESSOR OFP8-LIKE 4 282 - -
Gso5g1964 284 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 217 280 IPR006458 -
Gso5g1964 284 MobiDBLite consensus disorder prediction 185 203 - -
Gso5g1964 284 ProSiteProfiles OVATE domain profile. 219 278 IPR006458 -
Gso5g1964 284 MobiDBLite consensus disorder prediction 176 205 - -
Gso5g1964 284 MobiDBLite consensus disorder prediction 118 142 - -
Gso5g1964 284 Pfam Transcriptional repressor, ovate 223 280 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1964 Gso-Chr5 42776852 42778036 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso5g1964 Ovate 2.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1964 - - gmx:100819861 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1964 5 42776852 42778036 Gso8g0323 8 3035702 3036917 GST