Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1960 ATGTATAGATCATTTCTGAGATGTGATGATCCAAAAGGAGTAGTAGAATGTGGGACAATCAGGAAATACAGGACTCGTTCTCACAAAGTGAAGGACAAGACAAGAATCCAGAAGACGGGTGAAAACTTGGAGACATCCTTGTCCTTGATGAACAAAAGATACAAAGAAGAGAATAAGGTCCCAAAAGGATGTGATGGAAATCTCATTGATCCATCATCTTATAGAGATATTATGTGTGATGAAAAGTCTGAAGATATTGCAGAAGGTATTGCAAAAGGAGCTCTTGGTCTGCAAGATTCTCTAATCATGATTCGCAAGTTGCAAGAAGAGGCTTCACCACATTCAGCTTCTTTTAGGATAAAACAGACTATGAAACCTGAAAGAGACAGAATTGAAGCAAAGATGATTGGTAGAACGCAGGCTAATCCATTTGGGGAACAAAGTAATCCAAAGGGGTTTCAAAGACCACAGCCTTCAGCTGGTGGTTGTCTAAGTAATTGCCAAGAGGAACTTAAGAAGGTGATTAAGGAGAGTTTGGTTAGGCAAAATATGTTTCCAAAGACCTCTGAAAGATTAAACTCTGGTTCAGAAACTTTCTCTACAAGCACAAGCCAATATTCTGCTGTCAGGACTAACAGCCTTTTTGATCCTTCTTTCTCAGCAATAGCTCCAAAGATGGAAAGAGCACCTAGCCTAATTTTCAAGCTGATGGGTTTAGAAGAAGCCCCCTCAAAATCATTTCCAGCTGTTAAGCAGAAACAGTTGGATAGAGAGCTAGATATGTCAAAGGTAAGAAAGAATGACTCTATAGCTGAGAAACAAAAGGCCCTGAGGGAAACTCTTGACACCACACATTTCAAAGGAATTTTGAAGGAGAGTTTTGTCAAAGAGCCCAAGCTTCATGTGCATCATTTCAATGATACCAATTCCAAGCAGTTTGGTGATTTATCTCACATTGCACTTATGAAACCTCAATGTACTCTTTACGAGGAATCAGTAAAAAGTACCTATATGTCAGTTCCTCCAAAAGGTTCCAGTTCCACAAACATGGGAAAAGAAATGGAAAAAGGTATATGCAAACGGGTGAACAAAGAGGAAGGACCTAAATTTCTCAAAGAGGTTATGAAACTTGATGCAAAAGGAATTAATCCTGTTGAAGAATCATCAGGTAAGGTAAAGCTGTATTGTCACATTGGTCACACATCACAGACAAATGAAACAATTGATAAAAAATGGAAGGTGCAGACCATTAGTAGAAAACTGCTGGAAAAGGATATCTCACAACCTATAATTGCGGCAACAAGACCTCAATATCAACGAGGAATCCCCTCCACAAAATTGAGGAAGCTAAAAAGTGGGTCCAGAATCGACATGAATGAGATTTCTTACCTAAAGAGAACAGGTAGAAAGAATCAGATGAAGAACCAAAGCCCAATTATTGAGCCTGAACCAGCTAAACTAACTGTTGAACAAATCAGGAAGGGAGAAAAGAAGAAAATTTGCACTGAGATTAGTGCACTAGAAGATGAACTCCTGATGGTGTGTGAAGCAGATGCCCACATAAATAAGATTGGAGAAAAATACAAGCAGAGGAAGAGTTTTTCAGGCGATGACATTATTATGCTGCTCAAGTCTGAACATGAAAATAATGCTATCACTGCTTATAGCATTAATGCTGATAAAGAGGGGACTGAGCTGAAACATTTTCTTTTAACCTGTCCATCATTCATTGGACATGCAAAGAAGCTCTTCAATCTTGAAGTGGATTGTCCCAACACCCTACAAAAGGATGAAACTATTTACAACATGGCAAATCTCAGGCTTTATTTGGATTGCGCGTATGAACTCACTGAGCGTAAAAGCCTTCAAGAGTCACAAGTAGTTCGTTCTTTCTTGCTTGCTTGTGGAGGGAGCTCAAGATTACACATCTCCGTAGGCAGGTTGGCTGAAGAAATATGTAATGGCATTGAGAATCTGAAATTTTACAAAGAACACTCCGGGGAGGAAGTTTTTGCAGGCAATGATGTCTTTGCAATGATGGAGAAAGACATGAAGTGCAATGGAGAGATAAATGGTATGTGGGAGAAGGGTTGGAGGAGAGGATTTTCTGCAGATGAGGCTGAACTAGTTGTCAATAAAATAGAGATCCTGCTTATGAGTGGATTAATTGAGGAGATTATTATAAATTTATGA 2193 0.3912 MYRSFLRCDDPKGVVECGTIRKYRTRSHKVKDKTRIQKTGENLETSLSLMNKRYKEENKVPKGCDGNLIDPSSYRDIMCDEKSEDIAEGIAKGALGLQDSLIMIRKLQEEASPHSASFRIKQTMKPERDRIEAKMIGRTQANPFGEQSNPKGFQRPQPSAGGCLSNCQEELKKVIKESLVRQNMFPKTSERLNSGSETFSTSTSQYSAVRTNSLFDPSFSAIAPKMERAPSLIFKLMGLEEAPSKSFPAVKQKQLDRELDMSKVRKNDSIAEKQKALRETLDTTHFKGILKESFVKEPKLHVHHFNDTNSKQFGDLSHIALMKPQCTLYEESVKSTYMSVPPKGSSSTNMGKEMEKGICKRVNKEEGPKFLKEVMKLDAKGINPVEESSGKVKLYCHIGHTSQTNETIDKKWKVQTISRKLLEKDISQPIIAATRPQYQRGIPSTKLRKLKSGSRIDMNEISYLKRTGRKNQMKNQSPIIEPEPAKLTVEQIRKGEKKKICTEISALEDELLMVCEADAHINKIGEKYKQRKSFSGDDIIMLLKSEHENNAITAYSINADKEGTELKHFLLTCPSFIGHAKKLFNLEVDCPNTLQKDETIYNMANLRLYLDCAYELTERKSLQESQVVRSFLLACGGSSRLHISVGRLAEEICNGIENLKFYKEHSGEEVFAGNDVFAMMEKDMKCNGEINGMWEKGWRRGFSADEAELVVNKIEILLMSGLIEEIIINL* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1960 730 PANTHER OS01G0228800 PROTEIN-RELATED 1 728 - -
Gso5g1960 730 MobiDBLite consensus disorder prediction 141 160 - -
Gso5g1960 730 PANTHER OS01G0228800 PROTEIN 1 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1960 Gso-Chr5 42733372 42738108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1960 566 727 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 33.529 2.72e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1960 - - gmx:102663814 1447.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1960 5 42733372 42738108 Gso8g0319 8 2997668 3001067 GST
Gso5g1960 5 42733372 42738108 Gso7g0732 7 7929102 7933475 PCT
Gso5g1960 5 42733372 42738108 Gso9g1578 9 40105069 40109390 PCT