Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1933 ATGGACGAGGACGAGCAACTCGAACGATTCGACTCGGAGTTCGCGTCCACGAGTTCCATTTCCTCCACGCTCAGCACCGACGATTTCCGGAACCTCACCAGCTCCGGTGACATTTCCTCCATCAGCAGCGGCTCCGGCGAGATTCCTCCCGTCTCGGTCCTCGCGCCACCTTTTCTCCACTGCGAGGGGTCCAATGACGGCGAGACGGCGGCGGCAAGGGAGAAGTGCGTGGGAAGGAGTAACAAGGGAGTGAGCTGGGGACACACTTCGGTGATAGGGAGAAGGAAAGAGATGGAGGACGCCGTCGCCGTTATTCCGGGATTCATGTCTCGCACGTGTGATCACATCGGCGGTTGTACGGCTCCCGGTTCTAGATCCTCCGGTGAGATCGCTCCGGTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGCTCTCAGGTGGCTAAGTTTTGTGCGAAGCGGATGCACGATGTTATAGCAGAGGAGTGGGACCGAGAAATGGAAGGTGGCGCTCGATGGCACAGAAGATGGGAAACTGTATTTGCTAACAGTTTTGAGAGGACTGACAATGAAATCCTATCAGACGCAGTTGCGCCTGAAATGGTAGGATCTACTGCCTCTGTGGTGATTCTATCTGGTTGCCAAATTATTACATCCAACTGCGGCGACTCAAGGGTAGTTCTTTACCGCAGGACACAAACTATCCCCTTGACAGTGGATCAGAAGCCGGATAGACAAGATGAACTTTTGAGAATTGAAGGAGGAGGAGGAAGAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCCATGTCCAGGGCCATAGGTGATCGGTACTTGAGACCCTGGATTATTCCGGTGCCAGAGATAACTTTCACAGCAAGAACCGATGAGGATGAGTGCTTAGTTTTGGCTAGTGATGGACTCTGGGATGTAATGACCAATGAAGAGGTTGGAGAAGTAGCACGCCACATTCTTAGAAGGCGCCGCAGATCATTGTCAATGGAGGAAGCATCTCCTGCACAAGTTGTTGCCGACAGCTTGACTGAAATTGCATTAGGTAGAAATAGTAAAGATAACATTTCAATCATAGTTGTTGATCTGAAATCAAAGAGAAAACGTCAGCAAAGGCCTCCTTTAATTTCCTAA 1155 0.51 MDEDEQLERFDSEFASTSSISSTLSTDDFRNLTSSGDISSISSGSGEIPPVSVLAPPFLHCEGSNDGETAAAREKCVGRSNKGVSWGHTSVIGRRKEMEDAVAVIPGFMSRTCDHIGGCTAPGSRSSGEIAPVHFFGVYDGHGGSQVAKFCAKRMHDVIAEEWDREMEGGARWHRRWETVFANSFERTDNEILSDAVAPEMVGSTASVVILSGCQIITSNCGDSRVVLYRRTQTIPLTVDQKPDRQDELLRIEGGGGRVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTARTDEDECLVLASDGLWDVMTNEEVGEVARHILRRRRRSLSMEEASPAQVVADSLTEIALGRNSKDNISIIVVDLKSKRKRQQRPPLIS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1933 384 CDD PP2Cc 87 370 IPR001932 -
Gso5g1933 384 Gene3D - 75 380 IPR036457 -
Gso5g1933 384 ProSiteProfiles PPM-type phosphatase domain profile. 85 370 IPR001932 -
Gso5g1933 384 MobiDBLite consensus disorder prediction 1 26 - -
Gso5g1933 384 Pfam Protein phosphatase 2C 93 363 IPR001932 -
Gso5g1933 384 PANTHER ALPHABET, ISOFORM E-RELATED 67 379 - -
Gso5g1933 384 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 67 379 - -
Gso5g1933 384 SMART PP2C_SIG_2 114 370 IPR001932 -
Gso5g1933 384 ProSitePatterns PPM-type phosphatase domain signature. 135 143 IPR000222 GO:0043169
Gso5g1933 384 MobiDBLite consensus disorder prediction 12 26 - -
Gso5g1933 384 SUPERFAMILY PP2C-like 79 371 IPR036457 -
Gso5g1933 384 SMART PP2C_4 75 368 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1933 Gso-Chr5 42455865 42464985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1933 86 380 PP2C-type Phosphatase Gene Family AT4G26080 50.476 1.70e-98 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1933 K14497 - gmx:100782634 727.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1933 5 42455865 42464985 Gso8g0288 8 2712197 2718321 GST