Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1926 ATGGGCAGAGCCATAAGGTGGTTGAAGGGGTTGTTTGGGATAAGGACAGACAGAGAGCGCAAAGAGAATTCAAATCACTCAGACAGAGATTCCAGAGGTTTATGTCATAATCCAACCACAATTCCACCCAATATTTCACCTGCAGAGGCCGCTTGGTTGCAATCCTTCTACTCAGAAACTGAGAAGGAGCAGAACAAGCATGCTATTGCAGTTGCTGCAGCCACTGCAGCAGCCGCAGATGCTGCAGTGACTGCGGCTCAGGCTGCCGTGGCAGTGGTTAGACTAACCAGCCACGGCAATGGCAGAGACACCATGTTTGGTGGTGGTGGACAAGAAAGGTTGGCTGTTGTCAAGATTCAAACTTTCTTTAGAGGATACTTGGCAAGGAAGGCACTGAGAGCCTTAAAAGGATTGGTCAAGTTACAAGCACTTGTGAGAGGGTACTTGGTGCGGAAGCAAGCAGCAGCAACCCTGCATAGTATGCAGGCTCTAATTAGAGCTCAAGCAACAGTAAGGTCTAAGAAATCTCACGGACTCAGCAGCACAAAGAATGAAGCACATTTGTTTCAAACACAAGCACGAAGATCCATGGAGAGATTTGATGACATAAAGAGTGAGTACATAGCTCCCATCCACAGCAGAAGGCTATCATCTTCTTTTGATGCCACAATGAATAATGCAAACAGTGTTGATGGGAGCCCCAAAATAGTGGAAGTGGACACTGGCAGTGGCAGGCCAAAGTCAAGGTCTCGCAGGAGCAACACCTCAATGTCAGATTTTGGCGATGACCCATCATTTCAGGCACTTCCTTCTCCTCTTCCATTTGCTCATTTGTCCATACCAAGCCACAGGAACTACCACGACTCAGAATGGGGCTTAACAAGAGAAGAGTGCAGATTCTCCACAGCGCAAAGCACTCCACGATTTACCAACTCTTGTAGCTGTGGATCTGTTGTTGTTGCACCTATGAGTATGACACCTAAAAGTGTTTGCACCGAGAACTTCTTCTATGGCCAGTATCACAATTTTCCAAACTACATGGCCAGCACTCAGTCTTTCAAGGCCAAATTGAGGTCTCATAGTGCTCCAAAGCAACGCCCCGATCCAGGGCCAAAGAAGAGGCTTACCCTCAACGAGATGATGGAGTCTAGGAGTAGTTTAAGTGGGACTAGAATGCAAAGGTCTTGCTCACAGATTCAAGAAGCTATCAATTTTAAGAATGCTGTGATGAGTAAGCTTCAGAAGTCCGCAGAACTTGGTAGGGACACAGAATTGAACTTTTCCAACCAGAGGAGGTGGTGA 1302 0.47 MGRAIRWLKGLFGIRTDRERKENSNHSDRDSRGLCHNPTTIPPNISPAEAAWLQSFYSETEKEQNKHAIAVAAATAAAADAAVTAAQAAVAVVRLTSHGNGRDTMFGGGGQERLAVVKIQTFFRGYLARKALRALKGLVKLQALVRGYLVRKQAAATLHSMQALIRAQATVRSKKSHGLSSTKNEAHLFQTQARRSMERFDDIKSEYIAPIHSRRLSSSFDATMNNANSVDGSPKIVEVDTGSGRPKSRSRRSNTSMSDFGDDPSFQALPSPLPFAHLSIPSHRNYHDSEWGLTREECRFSTAQSTPRFTNSCSCGSVVVAPMSMTPKSVCTENFFYGQYHNFPNYMASTQSFKAKLRSHSAPKQRPDPGPKKRLTLNEMMESRSSLSGTRMQRSCSQIQEAINFKNAVMSKLQKSAELGRDTELNFSNQRRW* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1926 433 MobiDBLite consensus disorder prediction 18 33 - -
Gso5g1926 433 Gene3D - 111 164 - -
Gso5g1926 433 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Gso5g1926 433 PANTHER IQ-DOMAIN 5-RELATED 1 417 - -
Gso5g1926 433 MobiDBLite consensus disorder prediction 248 262 - -
Gso5g1926 433 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 417 - -
Gso5g1926 433 Pfam Protein of unknown function (DUF4005) 323 393 IPR025064 -
Gso5g1926 433 SMART iq_5 111 133 IPR000048 GO:0005515
Gso5g1926 433 SMART iq_5 134 155 IPR000048 GO:0005515
Gso5g1926 433 MobiDBLite consensus disorder prediction 230 263 - -
Gso5g1926 433 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Gso5g1926 433 Pfam IQ calmodulin-binding motif 139 153 IPR000048 GO:0005515
Gso5g1926 433 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Gso5g1926 433 MobiDBLite consensus disorder prediction 18 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1926 Gso-Chr5 42394229 42397028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1926 1 392 IQD Protein Family AT3G16490 52.525 9.65e-98 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1926 - - gmx:100800892 718.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1926 5 42394229 42397028 Gso8g0281 8 2647853 2650549 GST