Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1902 ATGGGGAGGAGGATACTGAATGATGCGTTGAGGAGTATGGTGAATGCAGAGAGGAGAGGGAAAGCTTTGGTGGAACTCAAGCCAATCTCCACTGTTATGTCTTCCTTTCTCCAAATCATGAAACACCATGGGTATATCAAGGACTTTCAAGTCTATGATCCGCATAGAGTGGGGAGGATAAGAGTTGAACTACAAGGTAGGATTAACGATTGCAAGGCCCTTTCGCACCGAAAGGACCTTAAGGCAAGGGATATTGAAGCCTATAGATTGCAGACTCTTCCAACACATCAGTGGGGTTATGTTGTCATTACAACTCCTGATGGTATTTTGGATCATGAAGAGGCCATTAGGAAGAATGTAGGTGGCCAGGTTCTTGGTTACTTTCACTAA 390 0.4436 MGRRILNDALRSMVNAERRGKALVELKPISTVMSSFLQIMKHHGYIKDFQVYDPHRVGRIRVELQGRINDCKALSHRKDLKARDIEAYRLQTLPTHQWGYVVITTPDGILDHEEAIRKNVGGQVLGYFH* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1902 129 Gene3D - 69 129 - -
Gso5g1902 129 SUPERFAMILY Ribosomal protein S8 3 129 IPR035987 GO:0003735|GO:0005840|GO:0006412
Gso5g1902 129 ProSitePatterns Ribosomal protein S8 signature. 99 116 IPR000630 GO:0003735|GO:0005840|GO:0006412
Gso5g1902 129 PANTHER 40S RIBOSOMAL PROTEIN S15A-5 1 129 - -
Gso5g1902 129 Pfam Ribosomal protein S8 6 127 IPR000630 GO:0003735|GO:0005840|GO:0006412
Gso5g1902 129 Gene3D - 2 68 - -
Gso5g1902 129 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 129 IPR000630 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1902 Gso-Chr5 42204113 42205451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1902 1 129 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 79.845 2.85e-78 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1902 K02957 - gmx:100792186 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1902 5 42204113 42205451 Gso8g0257 8 2445157 2449069 GST