Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1901 ATGGCCGAAGAGGAGAGGCATTGTAAGTCGAAGAGAAAAGAAGGCTTAACAAAGCACAGAATGTCCTCTAATCCAGTAATACTGCAGAGTGTGAACTTGACCAAGTATATACTGGAGACCAGCGTTTATCCACGAGAAGAAGAGACTCTCAAAGAGCTAAGGAAAGCCACTGCAGGCCACCCTTGGGGCTTTATGGGCGCTGCTCCCGATGCGGGTCAGCTAATGACCTTGCTCTTGAAGTTGTTGAATGCTAAGAAGACAATTGAAGTGGGAGTTTTTACTGGGTACTCTCTTCTCCTCACTGCACTTACCATTCCAGATGATGGAAAGATTATAGCCCTGGATCCAGACAGAGAAGCTTATGAGATAGGATTACCGTTCATTAAAAAGGCTGGTGTAGAGCACAAGATCGACTTCATAGAGTCTCCAGCTCTACCGGTTCTTGATAAACTCTTAGAAGATCCTTCAAATAAGGAAAGTTTTGACTTTGCCTTCGTTGATGCCGATAAAGATAACTATTGGAATTACCACGAGAGGCTTCTTAAACTGGTAAAGATTGGTGGGTTAATCATCTATGATAACACTCTCTGGGGTGGAACTGTTGCCTGGCCTGAAGAGGATGTTCCTGTACCAAAAAGGAAACTCAGGCAGGCTACACTGGCTTTCAACAAAGCAATTGCTGATGATTCTCGTGTTGAAATTTCTGTTGTTTCAATAGGTGATGGCTTCACTATCTGCAGGCGTGCTCATTGA 753 0.4409 MAEEERHCKSKRKEGLTKHRMSSNPVILQSVNLTKYILETSVYPREEETLKELRKATAGHPWGFMGAAPDAGQLMTLLLKLLNAKKTIEVGVFTGYSLLLTALTIPDDGKIIALDPDREAYEIGLPFIKKAGVEHKIDFIESPALPVLDKLLEDPSNKESFDFAFVDADKDNYWNYHERLLKLVKIGGLIIYDNTLWGGTVAWPEEDVPVPKRKLRQATLAFNKAIADDSRVEISVVSIGDGFTICRRAH* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1901 250 CDD AdoMet_MTases 88 192 - -
Gso5g1901 250 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 16 250 - -
Gso5g1901 250 PANTHER O-METHYLTRANSFERASE-RELATED 16 250 - -
Gso5g1901 250 MobiDBLite consensus disorder prediction 1 20 - -
Gso5g1901 250 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 26 249 IPR002935 GO:0008171
Gso5g1901 250 Pfam O-methyltransferase 39 248 IPR002935 GO:0008171
Gso5g1901 250 Gene3D Vaccinia Virus protein VP39 17 249 IPR029063 -
Gso5g1901 250 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 33 248 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1901 Gso-Chr5 42201409 42203101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1901 27 250 Monolignol Biosynthesis Gene Families AT4G26220 65.179 5.22e-108 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1901 K00588 - gmx:100792717 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1901 5 42201409 42203101 Gso8g0256 8 2441567 2442943 GST