Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1892 ATGAGGTTTACGTCACCTGCACTTCTCAGCCTTCTCATTCTCTGCCATCTGCTTCTCTCTCTTCCCTCTTTTACTTTCTCTCTCCTCGCCGATGACGCCGACCCGGAGACGGAGCTTCTCCTCGCCGGAGACAATGCAACCGCCTTCCTTAATGCCTCGCTTGCGAGATACGACGATGGTAGCTTCGCCAACATGATTGATCGGGCTCTCGAAAGAGAGTTCCCCGATAATGAGCAGAACGAAGGTACTGATCCTGGTGGTTTCAACAACAGTGTTGCTGAACAGCAGGCTGTTTTGGAAACTGTTGCCAGAGTTAAGCCCAAGAAAAATGATAGCAAAGAGGAAAAGTCATTTCAGTTCCATGATGTTTTCAATTTGGATAATGAGAATAGGGCAGAGGATATGCCAACTTTAATAGATCGAAAGGACAATGTCTTTATCATTTCCAATCTCAAGTCAAAGTATCCAGTTCTTCAATTAGACTTGAGATTGATATCAGATCTCGTAGTTGTCATTGTCTCTGCAACCTGTGGTGGCATTGCCTTTGCTTGTGCTGGACAACCGGTGATGACTGGATATCTGCTAGCAGGATCAATCATTGGACCTGGAGGTTTGAGTTTTGTTAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAATTTGGTGTCATCTTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCAACAACAAAGCTTCGAGTTGTTCGGGCAGTGGCTATTCTTGGAGGCCTACTCCAAATTTTCTTATTTATGTGCTTGTGTGGAATAACAGCTTCATTATGTGGTGGTAAATCATCTGAAGGAATATTTGTTGGTGCATTTCTATCCATGTCTTCAACAGCTGTGGTCTTGAAATTCTTAATGGAAAGGAATAGTGTCAATGCCCTTCATGGTCAGGTTATAATTGGAACCCTGATACTGCAGGATTGTGCTGTTGGATTGCTCTTTGCACTGATTCCTGTTTTGGGTGGAACATCAGGTGTTCTTCAGGGAGTAGTATCCATGACTAAGTCGTTGGTGATCTTAATTGCCTTTTTGGCCATTTTGACAATATTATCTCATACTTGTGTGCCATGGCTCCTTAAGCTTATGATCAGCTTATCCTCTCAGACCAATGAACTTTATCAATTGGCATCAGTGGCATTCTGCCTACTTGTTGCTTGGTGTAGCGATAAGCTGGGTTTAAGCCTTGAACTAGGTTCCTTTGCTGCGGGAGTGATGATATCAACAACAGATCTTGGTCAACATACACTTGAACAAGTCGAGCCAATTCGCAACTTTTTTGCTGCTCTGTTCTTGGCCAGCATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCATGTTGACATTTTACTGGCAGCTGTTATATTGGTGATCATTATAAAAACAATTGTAGCTACATCTGTTGTCAAGGGGTTTGGATACAATAACAAGACTTCAGTACTCGTTGGGATGTCCCTGGCACAAATTGGGGAATTTGCCTTTGTTCTTCTCAGCCGCGCTTCAAATCTTCATTTAGTTGAGGGAAAGTTGTATTTATTGCTCCTTGGAACAACAGCTCTTAGTCTGGTGACTACACCTTTGCTCTTCAAGCTAATTCCTGCTGTTGTGCATCTTGGGGTATTGTTGCGGTGGTTCCCGCCTGATAGTGCGGCAGAGATTGCATTTAAAGGGGACAGCTTTCGAGCGGACAGTGCTAAGCGTATTCCTTTAATGGTTCAAGGCTCTCATGATTCATGA 1761 0.4338 MRFTSPALLSLLILCHLLLSLPSFTFSLLADDADPETELLLAGDNATAFLNASLARYDDGSFANMIDRALEREFPDNEQNEGTDPGGFNNSVAEQQAVLETVARVKPKKNDSKEEKSFQFHDVFNLDNENRAEDMPTLIDRKDNVFIISNLKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVMTGYLLAGSIIGPGGLSFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQIFLFMCLCGITASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSVNALHGQVIIGTLILQDCAVGLLFALIPVLGGTSGVLQGVVSMTKSLVILIAFLAILTILSHTCVPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLAAVILVIIIKTIVATSVVKGFGYNNKTSVLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGVLLRWFPPDSAAEIAFKGDSFRADSAKRIPLMVQGSHDS* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1892 586 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 9 586 IPR045158 GO:0015386|GO:0071805|GO:1902600
Gso5g1892 586 Pfam Sodium/hydrogen exchanger family 169 538 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso5g1892 586 Gene3D - 162 545 IPR038770 -
Gso5g1892 586 PANTHER K(+) EFFLUX ANTIPORTER 6 9 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1892 Gso-Chr5 42108273 42116907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1892 8 586 Antiporters AT2G19600 80.651 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1892 - - gmx:100800102 1055.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1892 5 42108273 42116907 Gso8g0249 8 2352379 2361350 GST