Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1888 ATGGCGGGTGCGATGGGTATGAAGGTCGACAAGATTCGCCAAATCGTGCGTCTCAAGCAGCTGATGACTCGCTGGAAGCACATCAGCCTCCGCCGCCGCTCCTCCGACGAGCCCTCCGCCGTGCGACGCCCTCCCTCCGGCTTCATCTTCGTGTACGTGGGCCCCGAACGCACTCGCTTCGCCATCCCCGCGCGCTTCCTCAACCTTGCTCTCTTCGAGGGCCTCCTCAAACAAACCGAAGAAGAGTTCGGACTCCGAGGTAACGGCGGTTTGGTCCTCCCTTGCCAAGTCCCGTTCTTCTCTAACGTCGTCAAGTACCTCCACAAGGACGAACACAAGTACGGAAGTCTCTCTCTTCAAGACTTCGTTAACATGCTTTCCGCCTCCTCCTCCGATTCCTGTAAGGAAAACGTCGCCGTTTTTGCTCCTCTGCTCCAGAAAGCAGAGGTTTGA 453 0.5762 MAGAMGMKVDKIRQIVRLKQLMTRWKHISLRRRSSDEPSAVRRPPSGFIFVYVGPERTRFAIPARFLNLALFEGLLKQTEEEFGLRGNGGLVLPCQVPFFSNVVKYLHKDEHKYGSLSLQDFVNMLSASSSDSCKENVAVFAPLLQKAEV* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1888 150 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 138 IPR003676 GO:0009733
Gso5g1888 150 Pfam Auxin responsive protein 17 107 IPR003676 GO:0009733
Gso5g1888 150 PANTHER - 9 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1888 Gso-Chr5 42063239 42064151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1888 1 123 Calmodulin-binding Proteins AT3G43120 30.380 7.48e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1888 K14488 - gmx:100797463 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1888 5 42063239 42064151 Gso8g0243 8 2294687 2295687 GST