Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1879 ATGTCAAGGTTGATTCAAGAGAAGAAGCTGGGTGCAGGACGTGTTGTGGCAGTGGCAATTGAAAACAACAAAACAAGCCAATATGCAGCGAAATGGGCAGTTGACAATCTTCTTCCCAAAGACCAAGCTCTCCTATTGCTCCATGTTAGGCAAAGAGTATCTTCCATTCCTACGCCAACGGGAAACCTTGTATCCCTTGAAGGCAACGATGATGTGGCCAGAGCATACATGCAACAAATGGACAACGAATCCAAGGAGCTTTTCGCTTCATTTCGTGTCTTCTGCAATAGAAAGAGCATACAATGCAAAGAAATCTTATTGGAGGACATGGATATAAGTAAGGGATTAATAGAAGGTATTTCTAAGTATTCCGTGGAGCTTCTGGTACTCGGGGCAGCTTCAAGGAGTGGTCTTGTCAGAAGATTTAGGACATCTGATGTTCCAAGTCTTGTGTCCAAAGGGGCACCACCATTCTGCACTGTGTACATTATTGCCAAAGGAAAAATCTCATCTGTGAAAACTGCAACTGCTCCACTAACTGCTAAACCTCCAGCCCGTAACAATACAATGCAGCCGCAGCAGTCTCTCCAAACTCCTGAGAGAATGGATACACAAATAACACGTAACCCCATCCCACCACGACCATCATCAGAGAAGCCATCATACATTGTCCGCCAGCTATCATCAGATGAAGACGAAATCATATCACCATTCACCAGATCTGGTAGAGGAAATTACATATCATACGAGTCCTCAATTCCCGACTCTGATATTTCATTCGTGAGCAGTGGAAGGCCAAGTGTTGATAGGATGTTCCCTTCAATGTATGATGATATGGACTCTGGAACTAATCGGCTTTCAACAGGCTCAGATTTTGATGTCAGAAGCTTTGGTTCTTCATTCTCAGGAGCCAAGTCAATAGATCATGGTGACTATTCATTCAGTTCACAAGACAGTGGGACATCGATGTCATCGTCAATGTTTTCAGCTTCGGATGAAGTGGAAGCTGAAATGAGGAGACTGAAGCTAGAACTGAAGCAGACAATGGAATTGTACAGCTCAGCGTGTAAGGAAGCTATGACAGCAAAGCAAAAGGCACTAGAACTTCAGCGTTGGAAAGTGGAAGAACAAAGGAAATTGGAAGACGCACGATTAGCTGAAGGAACAGCATTGGCAATGGCTGAGAGGGAGAAAGTTAAATGTATGGCTGCCATGGAGGCAGCAGAAACATCTCGAAAAATTGCAGAGTTGGAAGCACAAAAGAGAATGAGTGTAGAGTCCGCTCACAAGAAGAAGAACGCAGATATCCTTTCACATAGTCCTGCCAGGTACAGAAAATACACTATAGAGGAGATAGAAGAGGCAACAAAATTCTTTTCCAACTCTCTCAAGATTGGCGAAGGTGGTTATGGACCAGTCTACAGGTCTGAACTAGACCACACGCCAGTTGCAATAAAAGTGTTAAAACCAGATGCAGCTCAGGGACGTTCACAGTTTCAGCAGGAGGTTGAAGTGCTAAGTTGCATAAGGCATCCAAACATGGTTCTCCTCCTTGGAGCATGCCCAGAGTTTGGGTGCTTAGTGTATGAGTACATGGCTAATGGAAGTTTGGATGATTGCCTCTTCCGGAGAGGCAACAAACCAGCTCTTCCTTGGCAACTAAGATTCCGAATTGCTGCAGAGATTGCCACCGGGCTCCTTTTCCTACACCAGACGAAGCCCGAACCCCTGGTGCATCGCGACTTAAAACCCGGAAACATTTTGCTTGACCGTAACTATGTGAGCAAGATCAGTGATGTGGGATTGGCAAGGCTTGTCCCTCCTACAGTTGCAGACACAGTGACACAGTATCGCATGACATCAACTGCTGGAACTTTCTGTTACATTGACCCTGAGTATCAGCAAACGGGCATGCTGGGAATCAAATCTGATATTTATTCACTGGGGATCATGCTTCTACAGATGATAACAGCCAAGCCACCAATGGGACTGACTCACCATGTTGGAAGAGCTATTGAGAAGGGGACTTTTGCGGATATGCTCGACCCAGCCGTTGAGGACTGGCCAGTTGAACATGCCTTGCATTTTGCCAAGCTTGCATTGGCGTGTGCAGAAATGAGAAGAAAAGATAGACCTGATCTTGGAAAAGTTGTATTGCCTGAGCTCAACAAACTCAGAGATTTTGCTGAAGAAAACATGCCCATGATGATGATGTTCGGTATGTCCACTGGATTCACTCCCAGAAACAACTACAATTACTCAAGCTCCACCTTTTCCTCAGTTCAAGACTCCATGAGTGAATCCCAGTCAATGTCAGGGATGTCTGGATATGAAAGCCGCTCAAGCTCATCGTCACCGGGGAGAATGTAA 2370 0.4527 MSRLIQEKKLGAGRVVAVAIENNKTSQYAAKWAVDNLLPKDQALLLLHVRQRVSSIPTPTGNLVSLEGNDDVARAYMQQMDNESKELFASFRVFCNRKSIQCKEILLEDMDISKGLIEGISKYSVELLVLGAASRSGLVRRFRTSDVPSLVSKGAPPFCTVYIIAKGKISSVKTATAPLTAKPPARNNTMQPQQSLQTPERMDTQITRNPIPPRPSSEKPSYIVRQLSSDEDEIISPFTRSGRGNYISYESSIPDSDISFVSSGRPSVDRMFPSMYDDMDSGTNRLSTGSDFDVRSFGSSFSGAKSIDHGDYSFSSQDSGTSMSSSMFSASDEVEAEMRRLKLELKQTMELYSSACKEAMTAKQKALELQRWKVEEQRKLEDARLAEGTALAMAEREKVKCMAAMEAAETSRKIAELEAQKRMSVESAHKKKNADILSHSPARYRKYTIEEIEEATKFFSNSLKIGEGGYGPVYRSELDHTPVAIKVLKPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEFGCLVYEYMANGSLDDCLFRRGNKPALPWQLRFRIAAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPTVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQMITAKPPMGLTHHVGRAIEKGTFADMLDPAVEDWPVEHALHFAKLALACAEMRRKDRPDLGKVVLPELNKLRDFAEENMPMMMMFGMSTGFTPRNNYNYSSSTFSSVQDSMSESQSMSGMSGYESRSSSSSPGRM* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1879 789 Gene3D Transferase(Phosphotransferase) domain 1 532 753 - -
Gso5g1879 789 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 789 - -
Gso5g1879 789 Pfam Protein kinase domain 462 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1879 789 SUPERFAMILY Protein kinase-like (PK-like) 437 718 IPR011009 -
Gso5g1879 789 Gene3D Phosphorylase Kinase; domain 1 438 531 - -
Gso5g1879 789 Pfam Universal stress protein family 14 145 IPR006016 -
Gso5g1879 789 Gene3D HUPs 14 164 IPR014729 -
Gso5g1879 789 MobiDBLite consensus disorder prediction 756 789 - -
Gso5g1879 789 CDD STK_N 15 167 - -
Gso5g1879 789 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 151 - -
Gso5g1879 789 MobiDBLite consensus disorder prediction 178 212 - -
Gso5g1879 789 SMART serkin_6 459 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1879 789 Coils Coil 331 351 - -
Gso5g1879 789 MobiDBLite consensus disorder prediction 178 220 - -
Gso5g1879 789 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Gso5g1879 789 ProSiteProfiles Protein kinase domain profile. 459 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1879 789 PANTHER OS02G0152300 PROTEIN 1 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1879 Gso-Chr5 41975448 41979489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1879 16 773 Receptor kinase-like Gene Family AT5G35380 56.714 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso5g1879 Pkinase 5.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1879 - - gmx:100803837 1449.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1879 5 41975448 41979489 Gso8g0233 8 2207222 2211125 GST