Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1832 ATGGAGAGTGACTTGAGCTGGGAGCAGAACACGCTCATAAATGAGCTAATTCAGGGGATGGAGGTAGCAAGGAAGTTGAAGGCAGACTTGAGGATGCCGTATTCAGTTGACTCAAGAGATTTGCTTGTGCAGAGGATATTATCTTCTTATGAAAAGGCTCTACTGATTCTAAGATGCAATGCATCATCAACTTCCGAGTTGCAGGCCATGAGTCAAGCAACACCAACTTTGCTACCCGAGTCCCCATTATCTGTCCATGGAAGTCCTCTGCGCGAGGACGTTGATGGGACCATCAAGGATCACCAAGAAGTTAAACATGATTCAAAGAAAAGAAAGGCAACGCCCAAATGGATGGATCATGTAAGAGTGAGCTGTGAAAGTGGTCTTGAAGGACCACATGAAGATAGCTACAACTGGAGAAAATATGGTCAGAAAGACATCCTTGGAGCCAAATATCCCAGAAGTTACTATAGGTGCACCTTCCGCAACACTCAGGGCTGTTGGGCAACAAAGCAAGTGCAGAGATCAGATGAAGATCCCACAGTATTTGACATAACTTACAGAGGCAAGCATACCTGTTCTCAGGGAAACAATGCCGTTCTGCCACCTAAGTCACCAGAAAAACAAGAAAAACCAACACACAGTCATAACATTGATATTCACCGTGCACAGGCATCTCAAGAAAGCCTTACAAAGTTCAGAAACATCTTGTCTGTCAACACAGATAATCTGAACAATGGAGATATGGCATATCCTTTCACTTTCCCTTCAACTTCATTTGGATGCATGAAACAAGACAACCACAGCTTGATTCCTTGGGCCCTGGAGAACGAGTCCTTCTTAAGCGACCTATACCAAACACACCTTTTATCCACAACAATACCAGAATCAAACTATTTCCCATCTCCAACTTTCCAGATGAATGTGTTTGATGGGATCTACAGCAAGCCACATTCGGAATCCGATATCAATGAGATCATTTCCACCAACACATCAGCAACCAATTCTCCAATTCCTGATTTCAATTTCTCACTTGATCCAGTGGAAATTGACCCAAATTTCCCTTTCAATACCCCAGGACTTTTCTCCTGA 1092 0.4341 MESDLSWEQNTLINELIQGMEVARKLKADLRMPYSVDSRDLLVQRILSSYEKALLILRCNASSTSELQAMSQATPTLLPESPLSVHGSPLREDVDGTIKDHQEVKHDSKKRKATPKWMDHVRVSCESGLEGPHEDSYNWRKYGQKDILGAKYPRSYYRCTFRNTQGCWATKQVQRSDEDPTVFDITYRGKHTCSQGNNAVLPPKSPEKQEKPTHSHNIDIHRAQASQESLTKFRNILSVNTDNLNNGDMAYPFTFPSTSFGCMKQDNHSLIPWALENESFLSDLYQTHLLSTTIPESNYFPSPTFQMNVFDGIYSKPHSESDINEIISTNTSATNSPIPDFNFSLDPVEIDPNFPFNTPGLFS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1832 363 ProSiteProfiles WRKY domain profile. 128 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso5g1832 363 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 359 IPR044810 GO:0003700
Gso5g1832 363 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 359 - -
Gso5g1832 363 Pfam WRKY DNA -binding domain 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso5g1832 363 SUPERFAMILY WRKY DNA-binding domain 132 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso5g1832 363 MobiDBLite consensus disorder prediction 194 215 - -
Gso5g1832 363 Gene3D WRKY domain 119 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso5g1832 363 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1832 Gso-Chr5 41565692 41567552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1832 5 258 WRKY Transcription Factor Family AT4G23810 46.739 1.14e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso5g1832 WRKY 7.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1832 - - gmx:100815760 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1832 5 41565692 41567552 Gso8g0187 8 1773508 1775414 GST