Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1821 ATGGCCGTGAAAATGCATCTTAGTTTCTTCATCTTAGCCACCATTGGCTGCATGCCATTGGTATCTGTGAGTTCGACGACTCATGTTGTCGGACACAAATTGGGTTGGAATTTGCCCAGTTACCCAGGGTTCTACGACGACTGGGCCAAGAAACAAACCTTCGTTGTTGGTGACGTGCTTCTTTTCCAGTATCACCCAGGACAGAACACGGTGGTTCAGGTAGACAAGAACGACTACGATCATTGCACTACCAGAAATATCCTCCACACCTACTTCAGAGGGAACTCTTCTGCTACTTTGGAGAAGCCTGGGGACTATTTTTACTTCTCTTCCGTTGGCAAGCATTGCGACTTTGGCCAAAAGCTTCATGTTACTGTTTCTCAGTGA 387 0.4677 MAVKMHLSFFILATIGCMPLVSVSSTTHVVGHKLGWNLPSYPGFYDDWAKKQTFVVGDVLLFQYHPGQNTVVQVDKNDYDHCTTRNILHTYFRGNSSATLEKPGDYFYFSSVGKHCDFGQKLHVTVSQ* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1821 128 SUPERFAMILY Cupredoxins 25 126 IPR008972 -
Gso5g1821 128 ProSiteProfiles Phytocyanin domain profile. 26 128 IPR003245 GO:0009055
Gso5g1821 128 PANTHER BLUE COPPER PROTEIN 2 127 IPR039391 GO:0009055
Gso5g1821 128 Pfam Plastocyanin-like domain 36 120 IPR003245 GO:0009055
Gso5g1821 128 Gene3D - 26 128 IPR008972 -
Gso5g1821 128 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Gso5g1821 128 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 2 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1821 Gso-Chr5 41489150 41489908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1821 20 126 Phytocyanin Superfamily AT2G25060 35.455 4.10e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1821 - - gmx:102660389 266.544