Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1819 ATGGAATTTCTACCCATTTTCTCTTTCATTTCCCTGTTGTTGTGTTTGGTTCTGTGGCAAGTAAGTGGTGAACCTGTTGAAGACAAGGAGGCTTTGCTTGACTTTGTGAGCAAGTTCCCTCCTTCAAGGCCTCTGAATTGGAATGAGAGTTCCCCCATGTGTGATTCTTGGACTGGAGTGACTTGCAATGTAGACAAGTCCAAAGTAATAGCAATTAGGTTGCCAGGGGTTGGATTTCATGGCACTATTCCGCCTGATACTATTAGCCGCCTCTCAGCACTGCAAACTTTGAGCCTCAGATCCAATGTCATAACTGGCCATTTCCCTTCTGATTTTTCCAATCTGAAGAACTTGTCTTTTCTCTATCTTCAGTTCAACAATATTTCTGGTCCTTTGCCTGATTTCTCAGCCTGGAAGAACCTCACTGTTGTCAATTTGTCCAATAACCATTTCAATGGCACCATCCCTTCCTCCCTTAACAACTTGACTCAGCTTGCTGGTTTGAACCTTGCAAACAACAGTCTTTCTGGAGAAATTCCCGACCTCAACCTGTCAAGATTGCAGGTGCTGAATTTGTCCAACAACAGCTTGCAGGGAAGTGTGCCTAATTCCCTGCTAAGGTTTCCTGAGTCTGCATTCATTGGGAATAACATTTCCTTTGGAAGTTTTCCCACGGTTTCTCCAGAGCCTCAACCGGCTCATGAGCCATCTTTCAAGTCCAGGAAGCGTGGAAGGCTCAGCGAAGCTGCGCTGCTGGGAGTTATTATTGCTGCTGGTGTTTTAGGCCTCGTGTGTTTTGTTTCTTTGGTGTTTGTGTGCTGCTCAAGAAGAGTTGACGAGGATGAGGAAACCTTCAGTGGGAAGTTGCACAAGGGAGAAATGTCTCCTGAGAAAGCAGTTTCAAGGAACCAGGATGCTAACAATAAACTGGTTTTCTTTGAGGGGTGTAATTATGCCTATGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTGCTGGGAAAGGGAACGTTTGGAACTGCCTATAAGGCAATACTTGAGGATGCAACCATGGTTGTTGTGAAGAGGTTGAAGGAGGTAGCCGCTGGAAAGAAGGATTTTGAGCAGCACATGGAGATTGTAGGAAGTCTTAAGCATGAGAATGTGGTTGAGCTCAAGGCATATTATTATTCCAAAGATGAGAAACTCATGGTATATGATTACCACAGTCAGGGGAGCATCTCTTCCATGTTGCATGGCAAAAGAGGAGAGGATAGGGTGCCTTTAGATTGGGATACTCGACTGAAAATAGCCTTAGGTGCTGCAAGAGGCATTGCTCGTATTCATGTTGAGAATGGTGGCAAGCTTGTACATGGCAACATCAAATCCTCAAACATCTTCCTCAACACCAAACAGTATGGCTGCGTGTCTGACCTTGGCCTGGCAACCATATCAAGCTCACTTGCCTTACCAATATCACGAGCAGCCGGTTACCGTGCACCAGAAGTTACAGACACCAGAAAGGCAGCACAGCCCTCAGATGTTTACAGCTTTGGTGTGGTGTTGCTAGAGCTTCTGACTGGGAAATCCCCTATCCACACAACTGGTGGTGATGAGATTATCCACCTTGTGAGGTGGGTTCATTCAGTTGTGCGCGAGGAGTGGACAGCTGAAGTGTTTGACTTAGAGCTGATGAGATATCCTAACATAGAAGAAGAGATGGTGGAAATGTTACAGATAGCCATGTCATGTGTGGTTAGGATGCCCGATCAGAGGCCTAAGATGTCTGAAGTAGTGAAGATGATAGAAAATGTGAGGCAGATTGATGCAGATACTCACTCATCATCTGGGAACCAAGTATCAACGTGA 1848 0.4556 MEFLPIFSFISLLLCLVLWQVSGEPVEDKEALLDFVSKFPPSRPLNWNESSPMCDSWTGVTCNVDKSKVIAIRLPGVGFHGTIPPDTISRLSALQTLSLRSNVITGHFPSDFSNLKNLSFLYLQFNNISGPLPDFSAWKNLTVVNLSNNHFNGTIPSSLNNLTQLAGLNLANNSLSGEIPDLNLSRLQVLNLSNNSLQGSVPNSLLRFPESAFIGNNISFGSFPTVSPEPQPAHEPSFKSRKRGRLSEAALLGVIIAAGVLGLVCFVSLVFVCCSRRVDEDEETFSGKLHKGEMSPEKAVSRNQDANNKLVFFEGCNYAYDLEDLLRASAEVLGKGTFGTAYKAILEDATMVVVKRLKEVAAGKKDFEQHMEIVGSLKHENVVELKAYYYSKDEKLMVYDYHSQGSISSMLHGKRGEDRVPLDWDTRLKIALGAARGIARIHVENGGKLVHGNIKSSNIFLNTKQYGCVSDLGLATISSSLALPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQIDADTHSSSGNQVST* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1819 615 Pfam Protein kinase domain 330 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1819 615 Pfam Leucine rich repeat 82 128 IPR001611 GO:0005515
Gso5g1819 615 SUPERFAMILY Protein kinase-like (PK-like) 331 595 IPR011009 -
Gso5g1819 615 ProSitePatterns Protein kinases ATP-binding region signature. 333 364 IPR017441 GO:0005524
Gso5g1819 615 ProSiteProfiles Protein kinase domain profile. 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1819 615 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Gso5g1819 615 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Gso5g1819 615 PANTHER OS05G0588300 PROTEIN 22 605 - -
Gso5g1819 615 Gene3D Transferase(Phosphotransferase) domain 1 403 614 - -
Gso5g1819 615 PANTHER PROTEIN, PUTATIVE-RELATED 22 605 - -
Gso5g1819 615 SUPERFAMILY L domain-like 38 207 - -
Gso5g1819 615 Gene3D Phosphorylase Kinase; domain 1 293 401 - -
Gso5g1819 615 Gene3D Ribonuclease Inhibitor 137 225 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1819 Gso-Chr5 41470704 41474951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1819 17 598 Receptor kinase-like Gene Family AT4G23740 67.399 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso5g1819 Pkinase 7.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1819 - - gmx:100814524 1162.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1819 5 41470704 41474951 Gso8g0177 8 1694002 1698473 GST
Gso11g0165 11 1366713 1370484 Gso5g1819 5 41470704 41474951 PCT