Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1818 ATGAACGACGCAGATGTCTCAAAGCAAATCCAGCAGATGGTGCAGTTCATCCGCCAGGAAGCTGAGGAAAAGGCCAACGAGATCTCTGTCTCCGCCGAAGAGGAATTCAATATCGAGAAGCTGCAGTTGGTCGAAGCCGACAAGAAGAAGATCAGGCAAGAATACGAACGCAAAGAGCGCCAAGTTGAAATTCGCAAGAAGATTGAGTACTCGATGCAGCTAAATGCTTCTCGGATTAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGAACTGTTGAATGTGAGTCATCATCGTCATTTGAATCTACTGAGTCATCATCATCATGAGTACAGAAACCTTCTGAAAGATCTCATTGTTCAGTGTTTGCTTAGACTGAAAGAACCTTCAGTCCTATTGAGATGTCGGAAAGATGACCTGCACTTGGTAGAGCATGTGCTGGATTCATCTGCACAGGAGTATGCTGAGAAAGCAAATGTTGATCCCCCAGAGATCATTGTTGACAACCAAGTTTATCTTCCACCTGGACCCAGTCATCACAATTCTCATGATCTCTACTGCTCTGGTGGGGTGGTGTTGGCTTCTCGTGATGGAAAGATTGTGTGCGAAAATACTCTTGATGCACGACTTGATGTAGTGTTCCGTAAAAAGCTTCCAGAGATCCGAAAGCAGCTCTTTGGACAAGTTGTTGTTTGA 720 0.4472 MNDADVSKQIQQMVQFIRQEAEEKANEISVSAEEEFNIEKLQLVEADKKKIRQEYERKERQVEIRKKIEYSMQLNASRIKVLQAQDDVISSMKEAASKELLNVSHHRHLNLLSHHHHEYRNLLKDLIVQCLLRLKEPSVLLRCRKDDLHLVEHVLDSSAQEYAEKANVDPPEIIVDNQVYLPPGPSHHNSHDLYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVVV* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1818 239 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 238 IPR002842 GO:0033178|GO:0046961|GO:1902600
Gso5g1818 239 Coils Coil 7 27 - -
Gso5g1818 239 Coils Coil 41 61 - -
Gso5g1818 239 Gene3D - 1 62 - -
Gso5g1818 239 Gene3D - 94 237 IPR038495 -
Gso5g1818 239 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 1 238 - -
Gso5g1818 239 Hamap V-type proton ATPase subunit E [atpE]. 8 235 IPR002842 GO:0033178|GO:0046961|GO:1902600
Gso5g1818 239 SUPERFAMILY V-type ATPase subunit E-like 87 235 - -
Gso5g1818 239 Pfam ATP synthase (E/31 kDa) subunit 16 234 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1818 Gso-Chr5 41457339 41461901 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1818 1 238 Primary Pumps ATPases(2) AT4G11150 72.269 7.80e-124 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1818 K02150 - gmx:100500452 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1818 5 41457339 41461901 Gso8g0176 8 1680718 1683871 GST