Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1799 ATGGATGAATTTGCGTGCTTGAGAGATTGGGATTTGGAAGCTATTGTGAGAGGAAACACCGGTGAAGCCACCACCATGGATGACCCAAATCCTGATTTTTCTTATTTCTTCTCTGAACAAGATGAGCTGCTTGATAGCTTTCCCGAATTCTCAGAAACCACGAGAGTCCTTGATGATTTGGAAGACCTTTACAAACCTTTCTACCCAGTTTTTCACCCTCTTTCACCGCACACCATCGTTACAACTTCCCCACCTATCCCCATAGAGCCTGAACAAGTGATCAAAGCATCAGAAGAGAAAGTAGCTCTACAAGGATTGAAAGTCACCGCAGCACCTAAATGTAAAAAAAGCAAGAAGAGCCAGAACAAGAGTGTGGTGAAGCAGGTGACAACAGCAGAAGGTCTTGATGATGCATGGGCATGGCGAAAATATGGACAGAAACCAATAAAGGGTTCACCCTATCCTCGAAGCTATTATAGATGCAGCAGTTCCAAAGGGTGTTTGGCGAGGAAACAGGTTGAAAGGAGCCACTTAGATCCTGCGGTTTTTCTGGTAACCTACACTGCTGAACACAGCCATCCCCACCCAACTCGAAGAAACTCTCTTGCTGGGACCACTAGGAAGAACAATTCCCTTGTTCCTCCTCCAACAACCACTCGTCACCAAAAGAAGACTACTTGTTCCTCAAGCGTTCAACAAAGCATGGACTTGAAGAAAGAGGAAGATTTTCTTGACTGGTTGGAGGATGATAGTGCTCAATTTGGTGATGGTTGGATTCCAAGCTCGGATCTAGAGAAACTGATAGGACTTGAGTGCCAACATTTTGCATTAGATACCGGTTTCACGGATGATTTTCCACACCCTTAA 867 0.4487 MDEFACLRDWDLEAIVRGNTGEATTMDDPNPDFSYFFSEQDELLDSFPEFSETTRVLDDLEDLYKPFYPVFHPLSPHTIVTTSPPIPIEPEQVIKASEEKVALQGLKVTAAPKCKKSKKSQNKSVVKQVTTAEGLDDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPAVFLVTYTAEHSHPHPTRRNSLAGTTRKNNSLVPPPTTTRHQKKTTCSSSVQQSMDLKKEEDFLDWLEDDSAQFGDGWIPSSDLEKLIGLECQHFALDTGFTDDFPHP* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1799 288 Gene3D WRKY domain 106 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso5g1799 288 SUPERFAMILY WRKY DNA-binding domain 129 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso5g1799 288 Pfam WRKY DNA -binding domain 136 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso5g1799 288 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 241 IPR044810 GO:0003700
Gso5g1799 288 MobiDBLite consensus disorder prediction 198 234 - -
Gso5g1799 288 MobiDBLite consensus disorder prediction 192 234 - -
Gso5g1799 288 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 241 - -
Gso5g1799 288 SMART WRKY_cls 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso5g1799 288 ProSiteProfiles WRKY domain profile. 130 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1799 Gso-Chr5 41267165 41269047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1799 1 235 WRKY Transcription Factor Family AT4G23550 45.935 3.90e-54 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso5g1799 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1799 K13426 - gmx:102663255 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1799 5 41267165 41269047 Gso8g0158 8 1488231 1489965 GST
Gso11g0184 11 1527412 1528587 Gso5g1799 5 41267165 41269047 PCT