Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1772 ATGGCGAGAAGATCTCCTCCTCGGGTTAGCCAAACGTACGAGACAGGTTGTACGTGGCGAATGTTAAGAATCTTCAATTTTCGTGAAGGAAATGGAAATTCTAGAAGTAGATCAGATGTGCTTAGCACATTTGATGAGAAGTACCTTCAAATTGGTGTAAGTTCCAGAAGAAGAAGAGATTATAGTTGTAAAAGTATCAGCGGCATAGAGAATGAACAGGTAGCAGATTGGAGAGAAGAAGTAACAAAGATGATTGTTGACCCGAGATTTGTGAATAAAAATTATCAGGGAAAAGATGGGGCAGACTGTGAGCCTAATCAGTTCTTGGATGCTTTACAGATTTTATTTTCAAACAAGGAGCTTTTCATAAAACTTTTGCAAGATCCCAACTCTTTGTTAGTAAAACAGATTCATGACTTACAAAGTACTCAAGTGAAAGAACCATATCAGCAGGCAAGGCAAAAAATGATGACTAAATTAAAAAAGCCTCAAGATGGTAATGCTACACAATGTGTAAAACCTTTTAAGCCCTTTGATAGATCTGATTTGAGGTTAAGTGTTAAGCCTCAGTCCTCCAACAGAATAGTAGTTTTGAAGCCTGGCACTGTTAATGTGGAAACAAGCTTTGCTAGTCCTCCCCATTCGCCTGATAGCTTCAGATCTCATGCACAAAATATTATGCCTTCATATTTTCCCTTTAGTTGCATAAAGAGAAAATTGAAGCATGTCATGAGAGTAAGGAGACAAGAACAGCAGTGGAGGACAGATGATGAAATGTCAAGTAAATTTTCCTGCAGTTCCCAGGGCTTGGAAGATGGTCAAAAAGTAAAACAATTGGAAATTGCTGAGAGAAATTCACCAATTAATGCCCATCCTAATGCTGGAAAAAGGTTGAATTCATATCTTGATCTGAAGAAGAGGGACAATATTATCAAGTTGGAGGATTCTGAGTTATGTATGGGGCTGGAAACTGCTTCATTTGGTGAAAGTCGTAGTAAGAACTCATACAATACTTCAGTTGGCCATTCTGAGGAAAATATACATGTTGAAGGTAGGAAAGGCCCATCTCAGATGTTAAACTGTGGAAGTGAGGAATGTGAACAGTGCACAAACTCTCTAGGGAGATCAATTCCTCGTCCTGACTCTTTGTACTTGCCAAGCATGCATAGGTACTGCAAGCACAGTTCCATTACTGAAAGGATGAGACATTACAGCAACTATCAAATGGTCCACAGAACCAGGTTGGGGCTTCCAAAAGAAGGGGAAAATGGCTCCTATAACTTTTTGGAACCGAAAATCAAGGATTCACCATTGGCCATTGTTAACATGCATACTGATAAGTTGCAACTTTTTGGTGAAGATATTAGAATCAGAAATAGCGTTCCTGGCGACAGTCTATTTGCACATTATGATATTCCTAGAGAACCAGATGGCAGATACAGGGACAGCCCTACTAGGAACATAGACATGAATGATATAACCGGAGGAAGTAGATCGTTTCTGGATTTGCATCCAGAGATCCAGACTTTTCCTTTTTCACAAGATGTTATTTCATCCCGTCAGAGAACAGATGATTATGTAAACATGGGAAACAAAGTTGAACACACCAGTGCTGAATCTGTTGTTCAGCAATTTACTAAGGATGATGTTACCAACCCACAAATCACCACCTTTCAACAAGATGAGTCACCGATACAAGTAATGCAAGACAAATTTGAAGAGAGCCATTTTGAAGACCTTATAAGACTCTCTTTGGATCCAATGAACAATTTAACCTTCTCCAAGGACATCTTACACAATGTAAGAGAAATTCTGCATGCTCTCAGCTTAAAATGGGATGAACTTACTCTGAAGAGATCATGTGACCAATTGTTGGATCCATCCACCTTTGTTGAACTGAAGGAACTAACTAGCCAACTTTCTGGTGGTAGAATCTTGCATGACTGTGTCATCGAAATTTTCATGCAGGTATATCAGAACTGTGGATTCCCACCTCATGTTTCAACAAAAAATCCAAATGTCCAAGCATATGTTGTGAAGAAACTTCTGGTTAAAGAGATTACAGAACTAGTTAAGTTGCACTTTCACCCTCGTCCATCACCTTTAACGTTAGAACAACTTGCTGAAAAGGACTTGGCAAGACGTGGTTCGTGGCTAAATATCCAAGTTGTTACAGAAGATATTGCAATAGAGGTGGAGAAAGATGTTCTTGAAAAAATGGTATTGGAAATTGCATCTGAGATGGATGTCAGAAGTATGTCTACTTATTACTCGTGGGATGATAAAGCACTATGGAAAGATTATCAAGCTACCATTTTCTGA 2322 0.3898 MARRSPPRVSQTYETGCTWRMLRIFNFREGNGNSRSRSDVLSTFDEKYLQIGVSSRRRRDYSCKSISGIENEQVADWREEVTKMIVDPRFVNKNYQGKDGADCEPNQFLDALQILFSNKELFIKLLQDPNSLLVKQIHDLQSTQVKEPYQQARQKMMTKLKKPQDGNATQCVKPFKPFDRSDLRLSVKPQSSNRIVVLKPGTVNVETSFASPPHSPDSFRSHAQNIMPSYFPFSCIKRKLKHVMRVRRQEQQWRTDDEMSSKFSCSSQGLEDGQKVKQLEIAERNSPINAHPNAGKRLNSYLDLKKRDNIIKLEDSELCMGLETASFGESRSKNSYNTSVGHSEENIHVEGRKGPSQMLNCGSEECEQCTNSLGRSIPRPDSLYLPSMHRYCKHSSITERMRHYSNYQMVHRTRLGLPKEGENGSYNFLEPKIKDSPLAIVNMHTDKLQLFGEDIRIRNSVPGDSLFAHYDIPREPDGRYRDSPTRNIDMNDITGGSRSFLDLHPEIQTFPFSQDVISSRQRTDDYVNMGNKVEHTSAESVVQQFTKDDVTNPQITTFQQDESPIQVMQDKFEESHFEDLIRLSLDPMNNLTFSKDILHNVREILHALSLKWDELTLKRSCDQLLDPSTFVELKELTSQLSGGRILHDCVIEIFMQVYQNCGFPPHVSTKNPNVQAYVVKKLLVKEITELVKLHFHPRPSPLTLEQLAEKDLARRGSWLNIQVVTEDIAIEVEKDVLEKMVLEIASEMDVRSMSTYYSWDDKALWKDYQATIF* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1772 773 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 78 748 - -
Gso5g1772 773 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 4 78 - -
Gso5g1772 773 PANTHER DUF3741 FAMILY PROTEIN 4 78 - -
Gso5g1772 773 PANTHER DUF3741 FAMILY PROTEIN 78 748 - -
Gso5g1772 773 Pfam Protein of unknown function (DUF3741) 90 131 IPR022212 -
Gso5g1772 773 Pfam Domain of unknown function (DUF4378) 601 743 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1772 Gso-Chr5 40979354 40984711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1772 528 746 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 27.477 1.48e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1772 - - gmx:121174910 1553.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1772 5 40979354 40984711 Gso8g0129 8 1197726 1203249 GST