Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1768 ATGCAGTGGGAGCAGGAGGGGCGGGGGAAAGGGGGAACTGACAAAGGAAATGGGTTTCCTCGGGCAGGTAGCCAGCAGCTTGTGTCTCTGGTGAAGTGGATAAATGCTGTGCTTCCTAATTTTAATCTGCCTTTAGATACTACAGAGGGGGAGTTGAGGGCACGGTTGAGGGATGGATCAGTATTATGCAGCATTTTGGACAATCTTGTTCCTGGTTCGGTGAAGGGAAGTGGTTCTTTGAATGAGCTAATTGGTGTGAAAAGGTTTCTGGTAGCTTTGGATGAATTGGGATTGTCTGGATTTGAATTGTCAGACCTGGAGCAGGGATCCATGGTGCCTGTGTTGCAGTGCCTTGAGACTCTGAAAACTCATTTTGCTTATAATACTGCACAAGAAAATATCCAAAGTGGTTCAAGAAAGAGATGGGACCAGTCAAATTTAACATTCTTTGAGGAATCTGATAGTTGCCTCAAGGATGCTTCAAAATTGCAACATGCTGTTGATGGTTCTGTTGTATCAGATGAAATCACTTCCATAGATCATATTGGAATAAAGTCTAATGAACTGTTCCAGTTGAAGCAAGGATTGCTTGCAGATTTTTCTGATGCCAAACTTAATGAAGTATTTAAATCAAACAATTTGGATAGTGTCTCAACTCAATTGCTTTTTAATATAGGAAATAGGATTCTGAGTGATATCTTTGAAAGGAAAAATGGAGATGTACCTCAGGCTCATCGTGCTGCATGCCTGTTGAGGAAAATTCTGCAAGTAATTCAGTTGCGCTTTTCAAATCAAGCAGAAAACATGAAAAATCAAAACAATCTTTTCAAGGCTCGTGAGGGAAAGTATCAAACAAGAATAAATGCACTTGAAACCTTGGCAGTAGGGACAACTGAAGAGAATGAGGTTGTTACAAGTTGGGTTCAGCAGTTGAAGTATGCTTTGCAGGTTGAACAAACTAAGTTTGAGGAGAAGAAGAAACTTGAAGAGCAGGATTTTTCTCGTTTAAAGAAAGAAAAAGTTCATAGTGAAATCGAAATTTCTGCATTGAAGCAAGATTTGGAAATAGTCAAAAGAACACATGAAGAACATGTTTCAGAGTTAGAATTGCGAGCTACTGAATCTAAAGCTGAATATGAAAAAAGGATAGAGGAACTTAAGCTTCATCTTGCAGATGCAAGAAAGCAAGTGAAGGAACTAGAGGCATTTTCAGAATCCAGATTTTTGAAATGGAAGAATAAAGAGGATACCTATCAAACTATCGTAAATTTTCAATTTGGAGCTTTCCAGGAACTGAGAGCTGCTATGAAGTCTGTCAAAGATGATGTGATAAAAACAAAAAGAAACTACTTAGAGGAATTCAAGTACTTTGGAATCAAGTTGAAAGGTCTAGCTGAGGCTGCTGAAAATTATCATGTAGTTCTAGCTGAAAATAGGAAATTGTATAATGAAGTTCAAGATTTGAAAGGTAATATAAGGGTATATTGTCGAATTAGACCATTTCTTCCGGGGCAAAGTCAAAGTCATACAACAATTGAATTTGTTGGTGATGATGGAGAACTAATTGTTGGCAATCCTCTTAAACAAGGAAAAGAAAACCGCAAGCTTTTTAAATTTAATAAGGTTTTTGGTCAAGCAACAAGTCAAGGGGAAATATTCAAGGACACTCAACCATTGATTCGATCTGTTCTTGATGGGTACAATGTTTGTATATTTGCTTATGGTCAAACCGGCTCGGGAAAGACATATACGATGAGTGGACCTGGCCTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCATATCTCCCAGAGTAGGAGAAGCTCTATTGTTTATGAAGTTGGAGTTCAAATGGTTGAAATTTATAACGAACAAGTTCGTGATTTACTATCAAGCAACGGTCCTCAAAAGAGACTTGGGATTTGGAATACTGCCCAACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGCATTCTGTGAATTCAATGGCAGATGTCCTCGAGTTGATGAATATTGGGTTGATGAATCGGGCAACTAGTGCCACAGCCTTGAATGAAAGAAGTAGCAGATCACACAGTGTTCTCTCTGTTCATGTTCGAGGAACGGATTTGAAGACCAACACACTGTTGCGTGGATGCCTTCATCTTGTAGATCTTGCAGGAAGTGAAAGAGTGGATCGTTCTGAAGCAACTGGAGACAGGCTTAAGGAGGCTCAACATATAAATAAATCACTATCTGCACTAGGAGATGTAATATTTGCTCTATCACAGAAGAGTTCACACGTGCCATATAGAAATAGTAAATTGACCCAACTTCTTCAGAGTTCGTTAGGTGGTCAAGCGAAAACCCTTATGTTTGTACAGCTTAATCCTGATGTTGCTTCATATTCTGAAACTGTAAGCACCTTGAAGTTTGCTGAACGGGTTTCTGGCGTGGAGTTAGGTGCTGCTCGTAGCAACAAAGAGGGGAGGGATGTGAGAGAACTTATGGAGCAGTTGGCATCTCTCAAGGATGTAATTGCAAGGAAGGATGAAGAGATTGAACGGTTACAGTCACTCAAGGCTAATCACAATGGTGCAAAGCTTGGTAGGATCTCAGTAAGACATGGGTCATCATCTCCAAGGAGACATTCCATAGGGACTCCCCGAATTAGCACGAGACTTGCAGGAGCAAGGAGCTTTGGAGTCAATGGAAAGGCAGCTTCTGACATGGATAACTGCTCAGAGTATAGTGATAAGCATTCAGAAACTGGTTCTCATCAATCAATGGATGATTTCAGGAACAAGTCCAGTTCCCTTCGGTTGAAGTTCACCAGAGATCATATCAGTCAAAATGTCAATGAAGACATTGACCTCTTAAGATTTGGAGATGCGGATTCAGAGGAGAGATTAAGTGACATATCTGATGGTGGTCTTTCAATGGGAACCGAAACTGAAGGTTCAATCAGCAGTATTGTGGAGTACACTCTTTTCCCTGAACTTGAGAAGGCAGCTGAAATTACACCAATGAAGGACACCACAACCGACAACCTTCCAGCTGAGAGCACAGAAAAGCCTATTATGCCATCCAAAATTCCCAAAGCTTCTCAAGTCCCACAAAAAGTGCAGTCAAAACATTCTAGGCATTCAATGAACAAAACCTCCTCGAAGGTTCTGTCAAGTGTTAGAAAACCCGCAGCCAGTAGCTCTTCTTCGGTGAAGCCCCCTAAACGATGGCAATAG 3243 0.4061 MQWEQEGRGKGGTDKGNGFPRAGSQQLVSLVKWINAVLPNFNLPLDTTEGELRARLRDGSVLCSILDNLVPGSVKGSGSLNELIGVKRFLVALDELGLSGFELSDLEQGSMVPVLQCLETLKTHFAYNTAQENIQSGSRKRWDQSNLTFFEESDSCLKDASKLQHAVDGSVVSDEITSIDHIGIKSNELFQLKQGLLADFSDAKLNEVFKSNNLDSVSTQLLFNIGNRILSDIFERKNGDVPQAHRAACLLRKILQVIQLRFSNQAENMKNQNNLFKAREGKYQTRINALETLAVGTTEENEVVTSWVQQLKYALQVEQTKFEEKKKLEEQDFSRLKKEKVHSEIEISALKQDLEIVKRTHEEHVSELELRATESKAEYEKRIEELKLHLADARKQVKELEAFSESRFLKWKNKEDTYQTIVNFQFGAFQELRAAMKSVKDDVIKTKRNYLEEFKYFGIKLKGLAEAAENYHVVLAENRKLYNEVQDLKGNIRVYCRIRPFLPGQSQSHTTIEFVGDDGELIVGNPLKQGKENRKLFKFNKVFGQATSQGEIFKDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPGLSSKSDWGVNYRALHDLFHISQSRRSSIVYEVGVQMVEIYNEQVRDLLSSNGPQKRLGIWNTAQPNGLAVPDASMHSVNSMADVLELMNIGLMNRATSATALNERSSRSHSVLSVHVRGTDLKTNTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALSQKSSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETVSTLKFAERVSGVELGAARSNKEGRDVRELMEQLASLKDVIARKDEEIERLQSLKANHNGAKLGRISVRHGSSSPRRHSIGTPRISTRLAGARSFGVNGKAASDMDNCSEYSDKHSETGSHQSMDDFRNKSSSLRLKFTRDHISQNVNEDIDLLRFGDADSEERLSDISDGGLSMGTETEGSISSIVEYTLFPELEKAAEITPMKDTTTDNLPAESTEKPIMPSKIPKASQVPQKVQSKHSRHSMNKTSSKVLSSVRKPAASSSSSVKPPKRWQ* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1768 1080 ProSiteProfiles Calponin homology (CH) domain profile. 24 126 IPR001715 GO:0005515
Gso5g1768 1080 MobiDBLite consensus disorder prediction 1 20 - -
Gso5g1768 1080 Coils Coil 351 403 - -
Gso5g1768 1080 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1080 - -
Gso5g1768 1080 MobiDBLite consensus disorder prediction 907 933 - -
Gso5g1768 1080 Gene3D Kinesin motor domain 433 821 IPR036961 -
Gso5g1768 1080 MobiDBLite consensus disorder prediction 913 933 - -
Gso5g1768 1080 Pfam Calponin homology (CH) domain 29 125 IPR001715 GO:0005515
Gso5g1768 1080 ProSiteProfiles Kinesin motor domain profile. 491 819 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g1768 1080 MobiDBLite consensus disorder prediction 1053 1080 - -
Gso5g1768 1080 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 857 IPR027417 -
Gso5g1768 1080 Pfam Kinesin motor domain 497 817 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g1768 1080 PRINTS Kinesin heavy chain signature 566 587 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g1768 1080 PRINTS Kinesin heavy chain signature 689 706 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g1768 1080 PRINTS Kinesin heavy chain signature 720 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g1768 1080 PRINTS Kinesin heavy chain signature 769 790 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g1768 1080 SMART kinesin_4 489 827 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso5g1768 1080 Coils Coil 833 863 - -
Gso5g1768 1080 MobiDBLite consensus disorder prediction 1009 1080 - -
Gso5g1768 1080 Gene3D - 22 129 IPR036872 -
Gso5g1768 1080 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 1080 - -
Gso5g1768 1080 SUPERFAMILY Calponin-homology domain, CH-domain 27 125 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1768 Gso-Chr5 40920964 40929246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1768 459 819 Calmodulin-binding Proteins AT5G65930 42.547 6.07e-74 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1768 K10406 - gmx:100777089 2059.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1768 5 40920964 40929246 Gso8g0126 8 1160076 1168363 GST