Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1767 ATGTCTGGATGCAATAAATCACCCAAAAATGGTCAACAATCATTCAAATATTGGCGGATTCAACACGGAGGGGCATCCTCTGAGGCCGTTCTTTCTTGTGTAGATTATTCGCCATCTCTTTCCACCAATGAGAACAAGCAATGCTATGGAAGTTCTCAACCAAAGTCCCCTCAGATACTGAGCACATCTCAGCTCATCTCGGCTATAGGCCTGATATGGGATTCTGCCAGTCGCCCGCTTTCGGTTTTACTTTCGAAGGAAACTGTGAATCAGGATGATAAAGGATTCCAGAAAGAGAAAATTCTGGATAGCGTTGATGAGAGAAAAAATGATTTGGTATATGCTTCAACCGACATTAAGTACTATCCTGTTACTGAGGGAGGTGCACAGATTGTGCAGGGAAAATTGGATTTCCCTAAGGTAATGCAGAAGATATCAGTACTTGACTCTTCTAATGAAAGTCAAGATTATATTGATTCTTTATTCAAGAGGTGTTTGCTGGCTAGTGATAAAACTACAAATAAAGATTGGAAAGAAATGGAACTTAGGAGGGAGGAAATGTCTTGTAAATCAGGAAATGTATATTGGTGGGTAGGTAGGAATATTACTAAGGCGCTAAATTGTCAAGTGGATGTTGCCCAACCTGAGATCCCGGAATCTAATGCTCCAGTTGCTGGGGGTAACATTTCAGTAGATACAAGCACCCCTGCATTGGCTAATGAGAGTGACGTGTCTAGTCCTAATTCAATCACACATGAAACTCAATCATTATATAATGCTGCAACTCTGAACACAAGAATAGTTAGCCCTCTTTGTTCAGACTATTTTCTTCAAGCTGTGCCTGATACTTGTCAGATCCTTTCTTCTAGTATCTGTGCGGACTATCATATTAACTCTCTAGCTTCATATAATAGTGCTTCTAATCAGTGCCAACATGAGATTGATGATAACAAATCTCTGGAAATCCAAAGAAGGCATTTCTTGGATATAGCTGATGATGAACCTAAGGTTCAGACCTCTGCAACCCATCTAAAACCTTGTAATTACCAAGCCAAGCAAGAACATGTTTTTTCTGGGGCGTTAGCTGGTATATGTGTCAGCCTTTGTCTGCATCCTGTTGACACAATTAAGACAGTCATTCAAGCATGCCGTGCTGAACACAGGTCCATCTTTTACATTGGGAAGTCAATTGTTTCTGATAGAGGTTTGCTTGGACTGTATCGTGGAATTACCACAAACATTGCATGTTCAGCTCCAATTTCTGCAGTTTATACTTTCTCCTATGAATCAGTTAAAGCAGCTTTGCTTCCTCATCTTCCAAAGGAGTATTATTCTTTTGCCCATTGCATGGGAGGTGGTTGTGCAAGCATTGCCACCTCTTTCATTTTTACTCCCAGTGAGCGAATAAAGCAGCAGATGCAAGTTGGTTCTCATTATCGCAACTGCTGGGATGTATTGGTTGGAATTATCAGAAATGGTGGTTTTTCCTCCCTATATGCAGGTTGGAGAGCTGTACTATGCCGGAACGTTCCACATTCAATTATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGCCATCTAGTATTCAACCCAACACATTTCAGACTTTAGTGTGTGGAGGATTAGCTGGATCTACGGCTGCTTTATTCACAACCCCTTTTGATGTGATCAAGACTAGATTACAGACACAGATTCCTGGGTCTGCAAATCAATATGATAGTGTGCTCCATGCACTTTACAAAATTAGTAAGAGTGAAGGATTTAAGGGCCTGTACAGGGGGTTGATTCCGAGGTTGATTATGTACATGTCTCAAGGATCACTGTTCTTTGCTTCATATGAATTTTTCAAGAGGACATTTTCTCTGGAAGCATCACATCCCACTGATTTATGCATTCAGGACAATGACGGGAATGCTGAAGAGTGA 1932 0.4079 MSGCNKSPKNGQQSFKYWRIQHGGASSEAVLSCVDYSPSLSTNENKQCYGSSQPKSPQILSTSQLISAIGLIWDSASRPLSVLLSKETVNQDDKGFQKEKILDSVDERKNDLVYASTDIKYYPVTEGGAQIVQGKLDFPKVMQKISVLDSSNESQDYIDSLFKRCLLASDKTTNKDWKEMELRREEMSCKSGNVYWWVGRNITKALNCQVDVAQPEIPESNAPVAGGNISVDTSTPALANESDVSSPNSITHETQSLYNAATLNTRIVSPLCSDYFLQAVPDTCQILSSSICADYHINSLASYNSASNQCQHEIDDNKSLEIQRRHFLDIADDEPKVQTSATHLKPCNYQAKQEHVFSGALAGICVSLCLHPVDTIKTVIQACRAEHRSIFYIGKSIVSDRGLLGLYRGITTNIACSAPISAVYTFSYESVKAALLPHLPKEYYSFAHCMGGGCASIATSFIFTPSERIKQQMQVGSHYRNCWDVLVGIIRNGGFSSLYAGWRAVLCRNVPHSIIKFYTYESLKQVMPSSIQPNTFQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSANQYDSVLHALYKISKSEGFKGLYRGLIPRLIMYMSQGSLFFASYEFFKRTFSLEASHPTDLCIQDNDGNAEE* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1767 643 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 637 - -
Gso5g1767 643 ProSiteProfiles Solute carrier (Solcar) repeat profile. 533 621 IPR018108 -
Gso5g1767 643 ProSiteProfiles Solute carrier (Solcar) repeat profile. 443 526 IPR018108 -
Gso5g1767 643 SUPERFAMILY Mitochondrial carrier 354 618 IPR023395 -
Gso5g1767 643 Pfam Mitochondrial carrier protein 534 623 IPR018108 -
Gso5g1767 643 Pfam Mitochondrial carrier protein 444 527 IPR018108 -
Gso5g1767 643 Pfam Mitochondrial carrier protein 354 435 IPR018108 -
Gso5g1767 643 ProSiteProfiles Solute carrier (Solcar) repeat profile. 350 434 IPR018108 -
Gso5g1767 643 Gene3D Mitochondrial carrier domain 444 635 IPR023395 -
Gso5g1767 643 Gene3D Mitochondrial carrier domain 300 443 IPR023395 -
Gso5g1767 643 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1767 Gso-Chr5 40914343 40918718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1767 354 622 Chloroplast and Mitochondria Gene Families AT1G07030 32.740 1.25e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1767 - - gmx:100778143 1298.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1767 5 40914343 40918718 Gso8g0125 8 1154524 1158732 GST