Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1761 ATGGGTTGTGGCTTTTCCAAGTACACAGCGTGCTGCACGGGTTCTGAGCAAGATGGTCTGGCTGCTGAGGCTCAGGTTGATGGTGGAAACGAAGACAATGTTGTTGAGGGTGTTGACTTGCCATGGTTTCATGAATTCACAATTGATCAGCTTAGGAAGGCTACGTCCGGATTTGCCATTGAAAATATAGTTTCTGAACATGGAGAAAAGGCTCCAAATGTGGTTTATAAAGGGAGACTTGATAATCAGATGCGAATTGCTGTCAAACGGTTCAACAGAAATGCCTGGCCAGAAGCGCAGCCATTTTTGGAGGAGGCTCGGGCCGTTGGTCAGCTCAGGAACCAAAGATTGATAAATCTGCTTGGATGTTGTTGTGAAGGTGAAGAAAGGTTACTTGTTGCAGAATATATGCCCAATGATACTTTGACAAAGCATTTATTCCATTGGGAAACTCAGCCCATGAGATGGGCAATGCGAATGAGGGTTGCTCTGTGCCTTGCCCAAGCTCTAGAGTACTGTACCAGCAAAGGACGTGCACTATATCATGATCTGAATGCCTACAGAGTTCTTTATGATGATGACTACAATCCTAGACTTTCATGCTTCGGTCTGATGAAAAATAGTAGGGATGGGAGAAGTTACAGTACAAATTTGGCGTTTACTCCACCTGAATATCTGAGGACAGGCAGAGTTACTCCAGAGAGTGTAACATATAGCTTTGGGACCCTTTTGCTTGACCTCCTCAGTGGCAAGCATATTCCTCCAAGCCATGCCCTTGACCTAATTAGAGACAAGAACCTTCAGATGCTATCAGACTCTTGCTTAGAAGGAGAGCTTACAAATGATGACGGGACTGAATTAGTGCGTCTAGCCTCACGATGTTTGCAATCTGAACCACGAGAGCGTCCTAATCCAAAGTCACTGGTTGCTGCTCTAATACCTCTACAGAAGGATTCTGAGGTTCCTTCTCATGTGTTGATGGGTATCCCAGATGGTACAGCTGCTTTTCCCCTTTCACCTCTTGGAGAAGCTTGTCTACGAATGGATCTGACTGCCCTGCATGAGGTGATGGAGAAAATTGGGTATAAAGACGACGAGGGCGCAGCAACTGAGCTTTCATTCCAAATGTGGACGAACCAGATGCAGGAAACGTTGAACTCAAAGAAGAAAGGGGATGCTGCTTTTCGGCACAAGGATTTTAAAACTGCAATTGATAGCTATACGATGTTCATTGATGTTGGAACCATGGTTTCTCCAACGGTTTATGTACGTCGTAGTCTATGTTATCTTATGAGCAATATGCCCGACGAAGCACTTAATGATGCAATGCAAGCACAAGTAATATCCCCCGTTTGGTACATTGCGTTTTATTTACAAGCTGTTGCTCTTTTAGCCCTGGGCAAGGAGAATGATGCCCAAGTGGCACTTAAAGAGGGTTCTTCACTGGAAACTAAAAAGAACACAAATTAG 1470 0.4463 MGCGFSKYTACCTGSEQDGLAAEAQVDGGNEDNVVEGVDLPWFHEFTIDQLRKATSGFAIENIVSEHGEKAPNVVYKGRLDNQMRIAVKRFNRNAWPEAQPFLEEARAVGQLRNQRLINLLGCCCEGEERLLVAEYMPNDTLTKHLFHWETQPMRWAMRMRVALCLAQALEYCTSKGRALYHDLNAYRVLYDDDYNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRVTPESVTYSFGTLLLDLLSGKHIPPSHALDLIRDKNLQMLSDSCLEGELTNDDGTELVRLASRCLQSEPRERPNPKSLVAALIPLQKDSEVPSHVLMGIPDGTAAFPLSPLGEACLRMDLTALHEVMEKIGYKDDEGAATELSFQMWTNQMQETLNSKKKGDAAFRHKDFKTAIDSYTMFIDVGTMVSPTVYVRRSLCYLMSNMPDEALNDAMQAQVISPVWYIAFYLQAVALLALGKENDAQVALKEGSSLETKKNTN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1761 489 Gene3D Tetratricopeptide repeat domain 371 483 IPR011990 GO:0005515
Gso5g1761 489 Pfam Protein tyrosine and serine/threonine kinase 74 311 IPR001245 GO:0004672|GO:0006468
Gso5g1761 489 Gene3D Transferase(Phosphotransferase) domain 1 138 329 - -
Gso5g1761 489 Gene3D Phosphorylase Kinase; domain 1 36 136 - -
Gso5g1761 489 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 489 IPR045845 GO:0004672|GO:0009742
Gso5g1761 489 SUPERFAMILY TPR-like 388 482 IPR011990 GO:0005515
Gso5g1761 489 SUPERFAMILY Protein kinase-like (PK-like) 40 321 IPR011009 -
Gso5g1761 489 PANTHER TPR DOMAIN KINASE 1 489 - -
Gso5g1761 489 ProSiteProfiles Protein kinase domain profile. 61 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1761 Gso-Chr5 40865212 40875878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1761 46 337 Glycoside Hydrolase AT3G07070 32.812 2.91e-39 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gso5g1761 PK_Tyr_Ser-Thr 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1761 K14500 - gmx:100797107 995.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1761 5 40865212 40875878 Gso8g0119 8 1100768 1111986 GST