Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1756 ATGGTTAACAAGACCTTGATGGCGGACCACAATGTTGCACTTCCTGTTGATTCTGAAGAGATACTTGCAGCAGCGGAAGGAATGGCTCAAACTGGAATTATAGTGTCTATAAATAGGGAAGTAGTTGGGGTTTTAGCAGTATCTGATCCATTGAAACCAGCTGCACAAGAAGTCATTTCCATTCTCAAGTCTATGAAAATTAGGAGCATCATGGTGACTGGGGACAACTGGGGTACTGCCAATTCTATAGCAAGGGAAGTTGGAATTGAAACTGTTATTGCTGAGGCCAAACCAGAGCAGAAGGCAGAGCAAGTGAAGGATTTGCAGGCTTCTGGGTACAGGGGCATGGTGGGGGATGGTATCAATGATTCACCAGCACTTGTGGCAGCAGATGTAGGAATGGCAATTGGTGCTGGTACAGACATTGCTATTGAGGCTGCCGATATTGTCCTGATGAAGAGCAACTTGGAGGATGTCATAACTGCCATTGATCTTTCCAGAAAAACGTTTTCCCGTATCCGTCTCAACTACGTATGGGCTTTGGGCTACAATCTACTTGGCATTCCAATTGCTGCTGGAGCTCTTTTTCCTTCTACACGATTTCAGTTGCCCCCATGGATTGCTGGGGCTGCCATGGCTGCATCTTCTGTCAGTGTTGTGTGCTGCTCACTACTGTTGAAATATTATAGGAGACCCAAGAAGCTGGACAACCTTGAGATCCGGGGCATAAGCATTGAGTGA 741 0.4629 MVNKTLMADHNVALPVDSEEILAAAEGMAQTGIIVSINREVVGVLAVSDPLKPAAQEVISILKSMKIRSIMVTGDNWGTANSIAREVGIETVIAEAKPEQKAEQVKDLQASGYRGMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYVWALGYNLLGIPIAAGALFPSTRFQLPPWIAGAAMAASSVSVVCCSLLLKYYRRPKKLDNLEIRGISIE* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1756 246 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 3 238 - -
Gso5g1756 246 SUPERFAMILY HAD-like 23 223 IPR036412 -
Gso5g1756 246 Gene3D - 2 51 IPR023299 GO:0000166
Gso5g1756 246 PANTHER ATP7, ISOFORM B 3 238 - -
Gso5g1756 246 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 21 205 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso5g1756 246 PRINTS P-type cation-transporting ATPase superfamily signature 43 54 - -
Gso5g1756 246 PRINTS P-type cation-transporting ATPase superfamily signature 65 75 - -
Gso5g1756 246 PRINTS P-type cation-transporting ATPase superfamily signature 117 136 - -
Gso5g1756 246 PRINTS P-type cation-transporting ATPase superfamily signature 140 152 - -
Gso5g1756 246 Pfam haloacid dehalogenase-like hydrolase 14 131 - -
Gso5g1756 246 Gene3D - 52 167 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1756 Gso-Chr5 40841225 40842554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1756 3 246 Primary Pumps ATPases AT1G63440 83.673 1.15e-140 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1756 K17686 - gsj:114413368 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1756 5 40841225 40842554 Gso8g0114 8 1076817 1082582 GST