Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1752 ATGAAGTTATATACTTCATTTTTGTTTCTTGCTTTGGTTTCCATGCTCTCTTTTGTGGCTTCTGTCATGGTCCCTAAAAATGAAGTTTTGGCACTTAAAACTTTCAAGGAAGCTGTGTATGAAGATCCACATATGGTTTTGTCCAATTGGAATACTTTGGATTCAGATCTTTGTGACTGGAATGGTGTTTCTTGCACTGCAACTCGAGATCATGTGATCAAGCTTAACTTATCTGGGGCTTCATTAAGGGGATTTCTTGCTCCAGAATTTGGGAAAATCACCTACTTACAAGAACTGATCTTGCATGGCAACAGTCTCATTGGAGTAATACCTAAAGAATTGGGCATGTTGAAATCTCTCAAGGTGTTGGATTTGGGAATGAATCAGTTAACTGGACCAATTCCTCCAGAGATTGGAAATTTGACCCAAGTTATGAAAATAAACCTGCAGTCCAATGGGTTGACTGGTAGGCTACCTCCAGAACTAGGAAAATTGAAATACCTTCAAGAGCTTCGGCTGGATAGGAATAAGCTTCAAGGATCTCTTCCTGGTGGTGGAAGTTCAAATTTTTCTTCAAATATGCATGGGATGTATGCCTCGGGTGTGAATTTAACTGGCTTCTGTCGTTCGTCTCAGTTAAAAGTTGCAGATTTTTCATGTAACTTTTTTGTTGGTAGCATACCCAAATGCTTGGCATATCTTCCAAGATCAAGCTTTCAAGGAAATTGTCTCCATATCAAAGACATAAAACAGCGGACTTCGGTGCAATGTGCTGGTGCTTCAGTAGTGAACCCAAAGTACCAACCTGCTACTAAACATGTGACCAAGCATCAAGAAGCATCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTGACTGGAACCATGGTTGGTTCTCTCTTTATTATTGCTATTCTCACTGCGATTCAGAGGTGTAACAACAAATCATCTATCATTATTCCTTGGAAAAAATCTGCAAGCGGAAAAGATTATATGGCAGTACATATAGACTCCGAGATGTTGAAGGATGTGATGAGGTATAACAGGCAGGACCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGATAGTGTGGTCTACAAGGGTACAATGAAAGGTGGGCCTGAGATTGCTGTGATTTCCCTCTGCATTAGGGAAGATAATTGGACAGGATACCTTGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCAAGGTTAAATCATGATAACACAGGAAAGCTGCTAGGATATTGTAGAGAGAGCAATCCATTTACAAGGATGCTGGTTTTTGAATATGCATCAAATGGGACACTTTATGAGCACCTACATTGTTATGAAGAAGGTTGCCAGTTGTCTTGGACAAGGCGTATGAAGATTATCATAGGCATTGCACGTGGACTTAAGTATTTGCACACTGAAATTGAGCCGCCATTCACTATCTCAGAATTGAATTCCAATGCCGTTTACCTCACAGAAGATTTTTCCCCTAAGCTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAGAAACTCTGGTAATGTTAGTAGCCAGGGTGCTGTTTGTGTTCTACCAAACACTCTTGAAGCGCGCCGTCTCGACACCAAAGGAAACATTTATGCTTTTGCAGTACTTCTATTGGAGATAATCAGTGGGAGACCTCCATACTGCAAGGACAAAGGGTACTTGGTGGATTGGGCTAGGGACTATCTTGAAATGCCAGAAGTAATGTCATATGTGGTGGATCCAGAGTTGAAACATTTTAGATATGAAGACCTCAAAGCAATATGTGAGGTGATAACTCTTTGCATCAGTCCTGATCCCTCTGTCCGTCCATCAATGCGTGAATTATGCACTATTCTGGAGAGCAGAATAGACACAACAATAAATTTGGAGCTAAAGGCATCATCACTGGCTTGGGCTGAGCTAGCACTTTCATCATAA 1971 0.4105 MKLYTSFLFLALVSMLSFVASVMVPKNEVLALKTFKEAVYEDPHMVLSNWNTLDSDLCDWNGVSCTATRDHVIKLNLSGASLRGFLAPEFGKITYLQELILHGNSLIGVIPKELGMLKSLKVLDLGMNQLTGPIPPEIGNLTQVMKINLQSNGLTGRLPPELGKLKYLQELRLDRNKLQGSLPGGGSSNFSSNMHGMYASGVNLTGFCRSSQLKVADFSCNFFVGSIPKCLAYLPRSSFQGNCLHIKDIKQRTSVQCAGASVVNPKYQPATKHVTKHQEASKPAWLLALEIVTGTMVGSLFIIAILTAIQRCNNKSSIIIPWKKSASGKDYMAVHIDSEMLKDVMRYNRQDLEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIREDNWTGYLELYFQREVADLARLNHDNTGKLLGYCRESNPFTRMLVFEYASNGTLYEHLHCYEEGCQLSWTRRMKIIIGIARGLKYLHTEIEPPFTISELNSNAVYLTEDFSPKLVDFESWKTILERSERNSGNVSSQGAVCVLPNTLEARRLDTKGNIYAFAVLLLEIISGRPPYCKDKGYLVDWARDYLEMPEVMSYVVDPELKHFRYEDLKAICEVITLCISPDPSVRPSMRELCTILESRIDTTINLELKASSLAWAELALSS* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1752 656 Gene3D Phosphorylase Kinase; domain 1 323 438 - -
Gso5g1752 656 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Gso5g1752 656 PANTHER PROTEIN MALE DISCOVERER 2 6 656 - -
Gso5g1752 656 Pfam Protein tyrosine and serine/threonine kinase 361 629 IPR001245 GO:0004672|GO:0006468
Gso5g1752 656 SUPERFAMILY L domain-like 27 235 - -
Gso5g1752 656 ProSiteProfiles Protein kinase domain profile. 357 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1752 656 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Gso5g1752 656 Gene3D Ribonuclease Inhibitor 141 257 IPR032675 -
Gso5g1752 656 Gene3D Transferase(Phosphotransferase) domain 1 439 645 - -
Gso5g1752 656 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 6 656 - -
Gso5g1752 656 SUPERFAMILY Protein kinase-like (PK-like) 336 630 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1752 Gso-Chr5 40822352 40827531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1752 3 631 Receptor kinase-like Gene Family AT2G01210 25.549 2.69e-55 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Gso5g1752 PK_Tyr_Ser-Thr 4.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1752 - - gmx:100779744 1288.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1752 5 40822352 40827531 Gso8g0111 8 1051488 1056736 GST
Gso11g0213 11 1766274 1771226 Gso5g1752 5 40822352 40827531 PCT