Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1742 ATGCCTCAGGGAAGCCTTGAAGTTTTTCTTGTTAATGCCAAAGGCCTCGACAACACTGATTATCTTTGTAACATGGACCCTTATGTGATCCTCATATGTCGCACTCAGGAGCAAAAGAGCAGTGTTGCAACAGGTCACGGAAGTGAGCCAGAATGGAACGAGAATTTTGTATTCAACGTGTCTGAAGGCGTTTCCGATCTGAGATTGAAGATCATGGACAGTGATTCCACGACGGCTCATGATCTCGTCGGAGAAGCTACCATTCCACTGGATGCATTGTATATTGAAGGAAGTATCCCTCCAACTTCATACAATGTTGTCAAGGATGGCCACTATTGTGGAGAGATTAAAATTGGCCTAACTTTTACGCCTCAGGATCGCAGCGAACGCTGCCTAGAGGAAAATTTTGGAGGATGGAAGGAGTCAGGCTACAGAGACTGA 441 0.4558 MPQGSLEVFLVNAKGLDNTDYLCNMDPYVILICRTQEQKSSVATGHGSEPEWNENFVFNVSEGVSDLRLKIMDSDSTTAHDLVGEATIPLDALYIEGSIPPTSYNVVKDGHYCGEIKIGLTFTPQDRSERCLEENFGGWKESGYRD* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1742 146 PANTHER C2 DOMAIN-CONTAINING 1 142 - -
Gso5g1742 146 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 125 IPR035892 -
Gso5g1742 146 Gene3D C2 domain 2 125 IPR035892 -
Gso5g1742 146 PANTHER OS02G0640000 PROTEIN 1 142 - -
Gso5g1742 146 Pfam C2 domain 4 93 IPR000008 -
Gso5g1742 146 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Gso5g1742 146 SMART C2_3c 5 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1742 Gso-Chr5 40726112 40728025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1742 4 128 C2H2 Transcription Factor Family AT4G21160 27.200 1.01e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1742 - - gmx:100782974 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1742 5 40726112 40728025 Gso8g0100 8 963025 964457 GST