Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1728 ATGGCGAATAAACTGAATATAAGGCTAGGAGAACCAACTCTGGTGCCACCAGCAGAAGAAACGGAAAAGGGTCTTTACTACTTCCTTTCAAACCTTGACCAGAACATAGCACATCCAGTTCGAACGGTTTACTTTTATAATAAGTCTGCATGTAGAGGGAACGAGGAAGCAGCACAAGTAATAAAGGATGCTTTGTCGAAGGTTCTTGTTCACTATTACCCTATGGCTGGAAGATTGGCCATAAGTTCAGAAGGGAAACTGATCATAGAGTGCACAGGTGAGGGTGTTGTGTTTGTTGAGGCTGAAGAAGCAAACTGTGTGATAAAGGACTTGGGAGATTTGACAAAACAACCTGACCTTGAAACTCTTGGAAAACTGGTTTATGATATCCCCGGTGCAACCAACATGCTTCAGATACCTCCTTTGCTAATTCAGGTGACAAAGTTCAAATGTGGTGGATTTGTTTTGGGCGTAAACGTGAACCATTGCATGGTTGATGGTATAAGTGCTATGCAATTCGTGAACGCATGGGGTGAGACAGCCAGAGGCATGGACTTGAGCATTTCACCAGTTCTGGACCGAACTATACTAAGAACACGAAATCCTCCAAAGATAGAGTATCCACACCACGAATTCGACGAAATTGAAGATGTATCAAATGTCACAAAAGTCTATGAGGAAGAGATCCTCTACGAGTCCTTTTGTTTCGACCCAGATAAGCTTGAGTTGCTTAAGAAAATGGCCACATCAGAAGATGGTGTTGTAAAGAAGTGCTCTACTTTTGAAGCACTTACAGCTTTTGTGTGGAGAGCTAGAAGTGAAGCCTTAGGGATGCACATGGACCCTAATCAACAAACCAAGCTACTTTTTGCTGTTGATGGAAGGTCTAAATTCGTGCCTCCAATACCAAAGGGGTACTTTGGCAATGCTATTGTGTTTTCAAATGCTCTATGCAAGGTAGAGGAGTTAGTGAATAATCCACTGTCATTTAGTGTGGGATTGGTTGGCAAAGCAATTGACATGGTGACAGACAGTTACATGAGATCTGCTATTGACTATTTTGAAGTGAAAAGATCAAGGCCTTCCTTAACTGCAACACTTTTGATCACAACATGGACTAGGATACCTTTCCGAAGTGCAGATTTCGGATGGGGGAAGCCCTTCTTTTTTGGGCCTGTAACTTTGCCAGGGAAGGAAGTCATTTTGTTCTTGTCTCATAACGAAGAAAGTAAAAGCATAAACGTGCTCCTAGGTTTGCCTGCTTCTGCCATGAAAAGGTTTGAAAGGCTGATGGAGATATGA 1302 0.4247 MANKLNIRLGEPTLVPPAEETEKGLYYFLSNLDQNIAHPVRTVYFYNKSACRGNEEAAQVIKDALSKVLVHYYPMAGRLAISSEGKLIIECTGEGVVFVEAEEANCVIKDLGDLTKQPDLETLGKLVYDIPGATNMLQIPPLLIQVTKFKCGGFVLGVNVNHCMVDGISAMQFVNAWGETARGMDLSISPVLDRTILRTRNPPKIEYPHHEFDEIEDVSNVTKVYEEEILYESFCFDPDKLELLKKMATSEDGVVKKCSTFEALTAFVWRARSEALGMHMDPNQQTKLLFAVDGRSKFVPPIPKGYFGNAIVFSNALCKVEELVNNPLSFSVGLVGKAIDMVTDSYMRSAIDYFEVKRSRPSLTATLLITTWTRIPFRSADFGWGKPFFFGPVTLPGKEVILFLSHNEESKSINVLLGLPASAMKRFERLMEI* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1728 433 Pfam Transferase family 12 432 - -
Gso5g1728 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 432 - -
Gso5g1728 433 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 7 432 - -
Gso5g1728 433 Gene3D - 216 432 IPR023213 -
Gso5g1728 433 Gene3D - 2 214 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1728 Gso-Chr5 40569166 40573617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1728 4 431 Monolignol Biosynthesis Gene Families AT5G48930 37.472 8.88e-88 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1728 K15400 - gmx:100527026 864.374