Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1715 ATGGCTCCCTCCGACCAATCTCATCATTCTCTTGTCCCTGGATTCCTGTACTCATCAAAAACACTGTCCCATTTGAATAATAACACCAATCATGGGTTGCCACCATCATCCTCCATTGCATCATCATCATTGCCACAAGGTCGGACAAAGAGTCCTATGATCCTTTCACCCAAAGAGGGAATCCGCATGTTTTCTCCTGCTTACTATGCTGCATGCAGTGCCGGTGGCATCTTCAGCTGTGGCCTTACCCACATGGCTGTCACTCCTCTCGATCTTGTCAAGTGCAACATGCAGATTGATCCTGTAAAGTACAAGAACATCACATCAGGATTTGGAGTGTTACTGAAGGAGCAGGGCGCTAAAGGTTTCTTCAAGGGATGGGTTCCTACTCTGCTAGGCTACAGTGCTCAAGGAGCATGCAAGTTTGGGTTTTATGAGTTCTTCAAGAAGTACTACTCAGACCTTGCAGGACCCGAGAATGCAATCAAGTACAAAACGATCATATATCTAGCTGGTTCTGCTTCGGCAGAAGTTATTGCTGATGTTGCCCTTTGCCCCATGGAGGCTGTCAAAGTTCGTGTACAAACTCAGCCTGGCTTTGCTCGAGGTTTGTCAGATGGATTACCCAAGTTTATCAAGGCTGATGGTGTTTCTGGGTTGTATAAAGGGCTTGTCCCTCTTTGGGGCCGTCAAATTCCATACACGATGATGAAATTTGCTTCCTTTGAGACTATTGTGGAGAAGATTTACAAATATGCGATCCCAACCCCCAAGGAGCAGTGCAGCAAAACTAAGCAGCTTGGAGTGAGTTTTGCAGCTGGATACATAGCAGGCGTACTGTGTGCAATTGTCTCACACCCTGCTGACAACCTCGTTTCTTTTCTCAACAATGCAAAGGGAGCCACTGTTGGTGATGCTGTGAAGAAGATTGGAGTAGTAGGTCTTTTTACTCGTGGCCTTCCACTTCGTATAGTTATGATTGGAACACTAACAGGAGCCCAATGGGGACTCTATGATTCATTTAAAGTATTTGTAGGGCTGCCTACTACTGGAGGAAGTGCTCCTGCTCCTGTTAGGTAG 1080 0.463 MAPSDQSHHSLVPGFLYSSKTLSHLNNNTNHGLPPSSSIASSSLPQGRTKSPMILSPKEGIRMFSPAYYAACSAGGIFSCGLTHMAVTPLDLVKCNMQIDPVKYKNITSGFGVLLKEQGAKGFFKGWVPTLLGYSAQGACKFGFYEFFKKYYSDLAGPENAIKYKTIIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFIKADGVSGLYKGLVPLWGRQIPYTMMKFASFETIVEKIYKYAIPTPKEQCSKTKQLGVSFAAGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKIGVVGLFTRGLPLRIVMIGTLTGAQWGLYDSFKVFVGLPTTGGSAPAPVR* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1715 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Gso5g1715 359 MobiDBLite consensus disorder prediction 27 50 - -
Gso5g1715 359 PANTHER PHOSPHATE CARRIER PROTEIN 1 359 - -
Gso5g1715 359 SUPERFAMILY Mitochondrial carrier 69 339 IPR023395 -
Gso5g1715 359 MobiDBLite consensus disorder prediction 27 51 - -
Gso5g1715 359 Pfam Mitochondrial carrier protein 169 252 IPR018108 -
Gso5g1715 359 Pfam Mitochondrial carrier protein 70 153 IPR018108 -
Gso5g1715 359 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 359 IPR044677 GO:0005315|GO:1990547
Gso5g1715 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Gso5g1715 359 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
Gso5g1715 359 Gene3D Mitochondrial carrier domain 68 344 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1715 Gso-Chr5 40411617 40415149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1715 5 357 Chloroplast and Mitochondria Gene Families AT5G14040 76.438 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1715 K15102 - gmx:100800530 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1715 5 40411617 40415149 Gso8g0074 8 704788 708183 GST