Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1705 ATGGCACAAGATTCAGAGAAAATTTGTGAAGGTGCTTCGGAGTCTCCAACGACCCCAGTTGGAACACAAGCACCAGCACCAGCACCAGCACCAGCACCACCAGAGAGTGAACCCAAAAGCACTTCAACTCAAAGAATCAAAGCCACAAGGCACCCTAGATGGACAAGGCAAGAAACACTTGTTCTGATAGAGTCCAAGAAAATGGTGGAAAATGGAGAACAAGTTTGCCGATTCAGATCAGCATCAGGGTGCGTTCAAACCGATCCGAAATGGGACATGGTGTCATCACTGTGTCAGCAGAGAGGGGTGAAGAGAGGGGCTGTTCAGTGCAGGAAAAGGTGGGGCAATCTTCTCACTGATTTCAGGAAGATCAAGAAGTGGGAATCTGGTGTAAAAGAGGTGGAGAGTGAGTCGTTTTGGATAATGAGAAATGATGTGAGGAAGGAGAAGAAGTTGCCCGGGTTCTTTGATTCTGTGGTGTACAATGTTTTGGATGGAGGGGTGTGCACCACTGTTGCATTTCCCTTGACACTGGTTAAGATGGTGCCAAAGGGTGAGAATGGTGTTGTTGTTGAGGGAGTGTCTCATCATCAGGAACAGTGTAAGGAGAACGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGATGAGGCGATTGTTGATGCTGAGAAAATGGGTTGGAGCACTGAGGAGGAAAACATGGAGACTAACATCAATGGTTTTCTTAAAACACCAACAGGTCTTCTTATTAAGGAAAAAGGTATTGCAGGGAGGCTCAAGAGGACACCCATACTCACATTGCCTACTCCAGAGAAACTACAGCAGCAGCCATCTTACCAAGGGAACTACGATCCTGGTTTTCAGAAGGAACCTATGTTCCAAGAGGGATACAAGAGAAAGAGGTTACCGTTGGATAGTAGTGAGGACTGCACAGATTTCAACAGCAACATTACCAATCTACTAAGGAGGAACAGTGACATGCTAAAAGCCCATCTTGGGGCTCAGAACATAAATTACCAATTGGCCAGGGACCAGCAGAAACAACAAACTGATATTATAGTTGCAGCCCTTGGCAAGCTCACAGATGCCCTCACAAAAATTGCTGACAAGCTGTAA 1122 0.467 MAQDSEKICEGASESPTTPVGTQAPAPAPAPAPPESEPKSTSTQRIKATRHPRWTRQETLVLIESKKMVENGEQVCRFRSASGCVQTDPKWDMVSSLCQQRGVKRGAVQCRKRWGNLLTDFRKIKKWESGVKEVESESFWIMRNDVRKEKKLPGFFDSVVYNVLDGGVCTTVAFPLTLVKMVPKGENGVVVEGVSHHQEQCKENEEEEEEEEEEEEEDEAIVDAEKMGWSTEEENMETNINGFLKTPTGLLIKEKGIAGRLKRTPILTLPTPEKLQQQPSYQGNYDPGFQKEPMFQEGYKRKRLPLDSSEDCTDFNSNITNLLRRNSDMLKAHLGAQNINYQLARDQQKQQTDIIVAALGKLTDALTKIADKL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1705 373 MobiDBLite consensus disorder prediction 195 221 - -
Gso5g1705 373 MobiDBLite consensus disorder prediction 1 51 - -
Gso5g1705 373 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 40 373 - -
Gso5g1705 373 Gene3D - 54 123 - -
Gso5g1705 373 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 40 373 - -
Gso5g1705 373 Coils Coil 194 227 - -
Gso5g1705 373 ProSiteProfiles Myb-like domain profile. 53 118 IPR001005 -
Gso5g1705 373 MobiDBLite consensus disorder prediction 22 36 - -
Gso5g1705 373 Pfam Myb/SANT-like DNA-binding domain 52 135 IPR044822 -
Gso5g1705 373 MobiDBLite consensus disorder prediction 204 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1705 Gso-Chr5 40316722 40319369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1705 53 140 Trihelix Transcription Factor Family AT5G03680 31.461 1.21e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1705 - - gmx:100793052 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1705 5 40316722 40319369 Gso8g0064 8 618703 621114 GST