Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1698 ATGGCCCTGCAGGCACCTAGCTTTCACATCGTCAATGGCAATGCTTGCCTGAGACGACCCTTGATGAACCCTTTTGCTCTAAAGTCATCCTTCTTCTCTGGTTCCCTCAATCTCTATCTTCATCCCAATCACCACCATCTTACTTCAGCTCCACCCAGGATTTCCATGCGCGTCGCTTCCAAACAGGCCTATATCTGTCGCGATTGCGGGTATATTTACAAAGACAGAACTCCCTTTGAGAAGTTGCCTGATAACTACTTCTGCCCTGTTTGTGGTGCTCCAAAGCGAAGATTTAGGGCCTATGCACCGGCTGTCACTAAAAATGACAATGACACAGCTGTTAGAAAGGCACGAAAAGCAGAACTACAGAGAGATGAAGCAATTGGGAAGGCATTTCCTATTGCAATTGTCGTGGGAATTGCAGTGCTTGCAGGATTATATTTCTATCTGAACAGCCAATACTAG 465 0.4624 MALQAPSFHIVNGNACLRRPLMNPFALKSSFFSGSLNLYLHPNHHHLTSAPPRISMRVASKQAYICRDCGYIYKDRTPFEKLPDNYFCPVCGAPKRRFRAYAPAVTKNDNDTAVRKARKAELQRDEAIGKAFPIAIVVGIAVLAGLYFYLNSQY* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1698 154 CDD rubredoxin 64 98 IPR024935 GO:0005506
Gso5g1698 154 ProSiteProfiles Rubredoxin-like domain profile. 61 101 IPR024934 GO:0005506
Gso5g1698 154 Gene3D - 61 100 - -
Gso5g1698 154 Pfam Rubredoxin 64 98 IPR024935 GO:0005506
Gso5g1698 154 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 10 154 - -
Gso5g1698 154 SUPERFAMILY Rubredoxin-like 61 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1698 Gso-Chr5 40248089 40249871 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso5g1698 Rubredoxin 1.5e-05 CL0045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1698 - - gmx:100812204 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1698 5 40248089 40249871 Gso8g0060 8 555683 557416 GST
Gso5g1698 5 40248089 40249871 Gso4g1710 4 47114930 47116321 PCT
Gso5g1698 5 40248089 40249871 Gso6g1382 6 13553786 13555067 PCT
Gso4g1710 4 47114930 47116321 Gso5g1698 5 40248089 40249871 PCT
Gso6g1382 6 13553786 13555067 Gso5g1698 5 40248089 40249871 PCT