Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1684 ATGGCTAGAAGTTTACCCGGAAGAACAGATAACAAGATCAAGAACTACTGGAAAAGCCACCTCAAGCGTTACCTCACTGCCCTAGGAATCGACCCTGTAACCCATAAACCATTCAAGGACGCCACCACAACTCCACCAACTAATAATTCTCAAGTGTCTATGGTAACCACCACAAGCAAGAATGGAACTAACAACACCGATAGCAATATCCCCCGCATCTATTATTTTAATGTCTTTCTCAATTCAAAGGTGCAAATTAGCGCTGATCATGATTGTTCAGCTGATGGTGCAGACTCAAATGGCAGCAGTGGTGTTACCATAGAGGAAGCTTCTCCTCAAGTCAACTTGGAGCTTTCCATTGCTCCACCCTCTCAGCCTGAAGATGCTTCCATGAAAGAAACCCTGAATGGTTGA 414 0.4444 MARSLPGRTDNKIKNYWKSHLKRYLTALGIDPVTHKPFKDATTTPPTNNSQVSMVTTTSKNGTNNTDSNIPRIYYFNVFLNSKVQISADHDCSADGADSNGSSGVTIEEASPQVNLELSIAPPSQPEDASMKETLNG* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1684 137 CDD SANT 1 21 IPR001005 -
Gso5g1684 137 Gene3D - 1 67 - -
Gso5g1684 137 PANTHER TRANSCRIPTION FACTOR MYB7 2 132 - -
Gso5g1684 137 MobiDBLite consensus disorder prediction 40 68 - -
Gso5g1684 137 MobiDBLite consensus disorder prediction 96 110 - -
Gso5g1684 137 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 132 - -
Gso5g1684 137 MobiDBLite consensus disorder prediction 90 110 - -
Gso5g1684 137 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 25 IPR017930 -
Gso5g1684 137 MobiDBLite consensus disorder prediction 35 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1684 Gso-Chr5 40128882 40130479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1684 1 125 MYB Transcription Factor Family AT4G34990 33.600 1.97e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1684 K09422 - gmx:100789710 270.781