Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1683 ATGGAGAGGAAAACATTTGGGTTTTTGTTCTTGCTCCTCCTTGTCTTAGCTTCTGATGTGACGGTGAAGAGAGCAGAGGCGAAAGATTGCTTGACAAGGAGGCACGGGTTCCAGGGTAGATGCTTATTCGACAGGCAATGTGCACATGTGTGCAGGAGCGATGGTTTCATCGGTGGTCAGTGCCGAGGCCCTCTTCGCAAATGCTTTTGCAGCAGGCCATGTTGA 225 0.5067 MERKTFGFLFLLLLVLASDVTVKRAEAKDCLTRRHGFQGRCLFDRQCAHVCRSDGFIGGQCRGPLRKCFCSRPC* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1683 74 Pfam Gamma-thionin family 30 74 - -
Gso5g1683 74 SUPERFAMILY Scorpion toxin-like 29 74 IPR036574 -
Gso5g1683 74 PANTHER DEFENSIN MTDEF4.7 1 74 - -
Gso5g1683 74 Gene3D - 28 74 IPR036574 -
Gso5g1683 74 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Gso5g1683 74 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Gso5g1683 74 SMART gth_4 29 74 IPR003614 GO:0006952
Gso5g1683 74 CDD Knot1 41 70 IPR003614 GO:0006952
Gso5g1683 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1683 Gso-Chr5 40121164 40121996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1683 9 74 Plant Defensins Gene Families AT1G61070 43.939 2.07e-15 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1683 - - gmx:100306228 147.517