Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1678 ATGACATCTGCAATGGTTCGTAGGAACATCGCCACCCACTACTCCAAGTTTGCTTCTTCTTGGTCTTTGTTGTCTCGCCATTCCTCAATCCTCAACCCTCTCTCTGTGTCTTTTTCTTCATTTCATAGCCAAGGTGTTGGTGGTGATGCATTGCCATCTTACATGCGTGGAGCTGTGTATTGGGAACCCAACAAGCCTCTCACCATCGAGGAATTTAACATGCCTCGCCCCAAGGCCGGTGAAGTTCTCATCAAAACCAAAGCCTGTGGAGTATGCCACTCTGATCTACATGTTATGAAAGGTGAAATTCCGTTTTCCAGTCCTTGTGTTGTGGGGCATGAGATTACCGGTGAGGTTGTTGAACATGGAGCACTCACTGACAGCAAAACCATAGAAAGGCTTCCAGTTGGATCTCGAGTTGTTGGGGCCTTCATCATGCCTTGTGGCAACTGCTCCTACTGTTCAAAGGGCCATGATGATCTATGTGAAGCTTTCTTTGCCTATAACCGGGCAAAAGGAACCCTCTATGATGGTGAAACTCGACTTTTTTTTCGAAACAGTGGAAAACCAGCATTCATGTATAGTATGGGAGGGCTTGCTGAATACTGCGTTGTGCCAGCAAATGGAGTGTCTGTATTACCAGACTCATTGCCATATACAGAGTCTGCAATTCTAGGATGTGCTGTTTTTACTGCTTACGGCGCTATGGCTCATGCAGCTCAAGTGCGTCCTGGTGATTCTGTTGCTGTTATTGGAACTGGAGGTGTTGGTTCTAGTTGTTTACAGATAGCTAGAGCCTTTGGTGCCTCAGATATAATTGCTGTGGATGTACGGGATGAAAAGCTACAGAAAGCAAAGACATTTGGTGCTACTCACACTGTAAATTCAGCAAAGGAAGATCCCATTGAAAAGATACTTGAAATTACTGGTGGAAAGGGTGTTGATGTTGCTGTGGAAGCCTTGGGGAAACCACAGACATTTGCTCAGTGCACACAAAGTGTGAAGGATGGGGGGAAAGCTGTGATGATTGGACTGGCACAAGCTGGTTCTTTAGGAGAGGTGGATATAAATCGGCTTGTTCGCCGAAAGATACAAGTTATTGGCTCATATGGAGGCAGAGCGAGGCAAGATCTTCCTAAGTTAATTAGACTGGCAGAAACAGGAATCTTCAATCTTGGCCATGCTGTTTCTAGAACATACACCTTTGACGAGGCAGGAAAAGCATTCCAAGATCTCAATGAAGGAAAAATTGTCGGTCGAGCTGTGATCGAGATAATATAG 1281 0.4536 MTSAMVRRNIATHYSKFASSWSLLSRHSSILNPLSVSFSSFHSQGVGGDALPSYMRGAVYWEPNKPLTIEEFNMPRPKAGEVLIKTKACGVCHSDLHVMKGEIPFSSPCVVGHEITGEVVEHGALTDSKTIERLPVGSRVVGAFIMPCGNCSYCSKGHDDLCEAFFAYNRAKGTLYDGETRLFFRNSGKPAFMYSMGGLAEYCVVPANGVSVLPDSLPYTESAILGCAVFTAYGAMAHAAQVRPGDSVAVIGTGGVGSSCLQIARAFGASDIIAVDVRDEKLQKAKTFGATHTVNSAKEDPIEKILEITGGKGVDVAVEALGKPQTFAQCTQSVKDGGKAVMIGLAQAGSLGEVDINRLVRRKIQVIGSYGGRARQDLPKLIRLAETGIFNLGHAVSRTYTFDEAGKAFQDLNEGKIVGRAVIEII* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1678 426 Gene3D - 59 415 - -
Gso5g1678 426 Gene3D - 232 369 - -
Gso5g1678 426 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 55 424 - -
Gso5g1678 426 SUPERFAMILY GroES-like 51 258 IPR011032 -
Gso5g1678 426 CDD Zn_ADH10 55 424 - -
Gso5g1678 426 Pfam Alcohol dehydrogenase GroES-like domain 80 210 IPR013154 -
Gso5g1678 426 SMART PKS_ER_names_mod 62 423 IPR020843 GO:0016491
Gso5g1678 426 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 217 390 IPR036291 -
Gso5g1678 426 Pfam Zinc-binding dehydrogenase 255 386 IPR013149 -
Gso5g1678 426 PANTHER NAD-DEPENDENT ALCOHOL DEHYDROGENASE 55 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1678 Gso-Chr5 40065727 40072341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1678 69 425 Monolignol Biosynthesis Gene Families AT4G37990 26.593 1.24e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1678 - - gmx:100802431 850.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1678 5 40065727 40072341 Gso5g1678 5 40065727 40072341 ECH
Gso5g1678 5 40065727 40072341 Gso8g0040 8 378422 382754 GST