Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1667 ATGAAGGTGAAGAAGGGTTGGCTCGCGGTTCAAGTGGAAGAAGAAGGTGGCGGTGGAGGGTCTCAAAGATTTGTGATCCCAATTTCGTATCTTTATCACCCTCTCTTCAAGCACCTTTTGGATAAGGCTTATGAGGTTTATGGCTACCACACCGAGGGTCCTCTCAAACTGCCATGTTCAGTCGATGACTTTCTTCATCTCCGATGGAGAATCGAGAAAGAATCCACTACCCATCACCACCACCAACATCATCATCATCACCATCATCGCCAACTTCCTCACGCCTTGTATTTCCATGCTTGTTAA 306 0.4673 MKVKKGWLAVQVEEEGGGGGSQRFVIPISYLYHPLFKHLLDKAYEVYGYHTEGPLKLPCSVDDFLHLRWRIEKESTTHHHHQHHHHHHHRQLPHALYFHAC* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1667 101 PANTHER SMALL AUXIN-UP RNA-RELATED 1 89 - -
Gso5g1667 101 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 89 IPR003676 GO:0009733
Gso5g1667 101 Pfam Auxin responsive protein 3 70 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1667 Gso-Chr5 39956800 39957425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1667 3 92 Calmodulin-binding Proteins AT5G20810 40.000 6.00e-13 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1667 K14488 - gmx:100306557 189.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1667 5 39956800 39957425 Gso8g0032 8 296213 296530 GST