Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1658 ATGTCGGTGGTTCCTTGCAATTGCAACCACACCACAGAGAAAGATAACCTTAGTGGTGAAAGTGAGAGCTTTCACAAGTTTTTTGAGTGCTGGATTTCTGAGCAAAAACAACATCTGAAGGACCTTTTAGCTGCTGAATCAACCCAGCTAATTAGTGATGAGGAGCTTCAGGCACTGAATGATAAGGTGGTTGAGCATTATGAGTACTACTACAAGGCCAAGTCAAGGTGTGCAAAGCAAGATGTATTGGCCATGCTGTCCCCAACATGGATGAGTTCCTTGGAAGAGGCTTTTCTTTGGATTGGTGGATGGAGACCAAGTATGGCATTTCACTTGATATATTCAAAGTCCGGCTTGCAATTCGAGGCCCGGCTCGATGAAGTCCTCCAGGGTCTAAGAACACATGATTTGGGGGACCTATCAGCATCACAACTTGCTCAGCTTGATGAGATGCAAAGGAGGACTATCTTGGAGGAGAGGGAGATCACTGATTTGATGGCAAGGCACCAGGAGACAGTGGCTGATGCCTCAATGGTGGAGTTGTCTCATGTGGTTTCTGAGATGATTAGAGCCAATCAAAGAGGAGAGGTTGATCAGAGTAAGGAAATAGAGAACAAGGTTGAATCAACTCTTGTGCTTAAGGAGGAAGGTTTGGAGAAGATTCTGCTGAAAGCTGATGAGCTAAGGTTTATAACACTCAAGGATGTTGTTGATGTTCTGACTCCAAAACAGGCCATTCATTTCTTGATTGCTGCTGCAGAGCTGCACCTGAGGCTGCATGAGTGGGGCAAGAAGATGGATGCAAGAAAATGCAATCAAGGTTTTGGTGAAGGTAAAAGCCACAATTCATCAAGTTGA 858 0.4487 MSVVPCNCNHTTEKDNLSGESESFHKFFECWISEQKQHLKDLLAAESTQLISDEELQALNDKVVEHYEYYYKAKSRCAKQDVLAMLSPTWMSSLEEAFLWIGGWRPSMAFHLIYSKSGLQFEARLDEVLQGLRTHDLGDLSASQLAQLDEMQRRTILEEREITDLMARHQETVADASMVELSHVVSEMIRANQRGEVDQSKEIENKVESTLVLKEEGLEKILLKADELRFITLKDVVDVLTPKQAIHFLIAAAELHLRLHEWGKKMDARKCNQGFGEGKSHNSSS* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1658 285 Pfam Seed dormancy control 38 115 IPR025422 GO:0006351|GO:0043565
Gso5g1658 285 PANTHER OS01G0159000 PROTEIN 18 272 - -
Gso5g1658 285 PANTHER - 18 272 - -
Gso5g1658 285 ProSiteProfiles DOG1 domain profile. 21 269 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1658 Gso-Chr5 39856461 39857912 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1658 6 270 Calmodulin-binding Proteins AT5G10030 28.302 1.01e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1658 - - gmx:100784399 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1658 5 39856461 39857912 Gso5g1658 5 39856461 39857912 ECH