Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1639 ATGATGCAAGGCTGTGAGGTTGATGCCATTGGCATAAACTACACGATCCACACACACAAATCGGAGCACCCTTTTAAAATCTTCAGCAACAAATCTGCACATCTTGACACTGAACAAGATGGTAAAGAGCCAGAAGAGGAAGCAGAAGTTGAACAAAGTTGCAGTGGAGTAAGGCATGTGCTGAAGAATGTGAGTTTCCAAGCCAAGCCATGGGAGATCCTAGCAATTGTTGGGCCAAGTGGAGCTGGCAAATCATCACTGCTTGAGATTCTTGCTGGTAAACACAGCCCTCAAAGTGGAACTGTGTTTCTGAACCACAAGCCTGTAGACAAAGCTCAGTTCAGGAAGCTTTCAGGGTATGTTACACAAAAGGACACTTTGTTTCCTTTACTTACAGTTGAAGAAACCCTCATGTTTAGTGCAAAGCTGAGGCTGAAGCTTTCTCAAGAGCAACTTTGCTCCAGGGTCAAGTCACTGATTCAGGAGCTTGGACTTGACAATGTTGCTGGCACTAGAATTGGTGATGATAGGGTCCGAGGCATATCTGGTGGTGAGAGGCGCAGAGTCTCCATTGGTGTTGAAGTCATTCATGATCCAAAAGTGCTGATTCTTGATGAACCAACTTCAGGGCTTGACAGTACTTCAGCTTTGCAAATAATTGACATGCTTAAGGTCATGGCTGACACAAGAGGGAGAACCATAATCCTTAGTATTCACCAACCCGGGTTCAGAATAGTGAAGCTGTTCAATTCATTGTTGCTGTTGGCCAATGGAAGTGTTTTGCACCACGGAACAGCTGATTTGCTTAGTGTGAATCTAAGGCTGATGGGTCTGGAGCTTCCTCTTCATGTCAATGTAGTTGAATTTGCCATTGAGTCCATTGATACCATTCAGCAGCAACAGAAATGTGTGCCAGTTCAGGTAGAAACTCCAAGGCAACTGCCAGGGACAATACAACAGAAGAAAGGTGGTGATGGTGAAGCAGGTGAGGGTAGGAATGGTAAGCTCACTTTGCAACAGCTCTTTCAGCAATCCAAGGTAATTGATGAACAAACCATGTATGCTGGAATGGATTTCACTAGTGAGTTTGCTAATTCTAGATTGAGAGAAACTATGATTCTCAGTCATAGGTTCTCCATGAACATATTCCGTACAAAAGAGCTATTTGCATGCAGGACAGTTCAGATGCTGGTTTCTGGGCTGGTTGTGGGGTCCATCTTTTGTAACCTTAAGGATGATCTAGAGGGAGCTTTTGAAAGGGTGGGTCTATTTGCTTTCATATTAACGTTTTTATTGTCAAGCAGCATAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAGACATCTTGTGGAAGCTATCGTGTGTCATCCTATGCTATTGCAAATGGCCTAGTTTACTTGCCATTTCTTCTCATCCTAGCCATTTTGTTCTCAATGCCCTTGTACTGGCTTGTAGGGCTCAACCGGAACTTCTTGGCTTTTTTGCACTTTCTGTTGCTGATATGGCTGATTCTTTACACGGCCAATTCAGTTGTGGTGTGTTTCAGTGCTCTGGTGCCTAATTTTATTGTTGGGAACTCAGTGATTGCTGGTGTTATAGGGTCATTCTTCTTATTCTCTGGATACTTCATATCAAAACAGGAAATTCCAAATTACTGGATTTTCATGCATTATATATCCTTGTTTAAGTATCCCTTTGAAGGGTTCCTGATCAATGAGTTCTCCAACTCGGGGAAGTGCTTGGAATACATGTTTGGGGCATGTATAAAGAGCGGAGAGGATGTGCTTAAAGAAGAAGGGTACGGGGGAGAGAGTAATAGATGGAAGAATGTTGGGGTCACTGTGTGCTTCATCTTGGTTTACAGGTTCATTTCTTATGTTATTCTTAGATACAGATGTTCCCAGAGGGGATTTGGCAGGGTTGTCACCAACTAA 1950 0.4313 MMQGCEVDAIGINYTIHTHKSEHPFKIFSNKSAHLDTEQDGKEPEEEAEVEQSCSGVRHVLKNVSFQAKPWEILAIVGPSGAGKSSLLEILAGKHSPQSGTVFLNHKPVDKAQFRKLSGYVTQKDTLFPLLTVEETLMFSAKLRLKLSQEQLCSRVKSLIQELGLDNVAGTRIGDDRVRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADTRGRTIILSIHQPGFRIVKLFNSLLLLANGSVLHHGTADLLSVNLRLMGLELPLHVNVVEFAIESIDTIQQQQKCVPVQVETPRQLPGTIQQKKGGDGEAGEGRNGKLTLQQLFQQSKVIDEQTMYAGMDFTSEFANSRLRETMILSHRFSMNIFRTKELFACRTVQMLVSGLVVGSIFCNLKDDLEGAFERVGLFAFILTFLLSSSIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFSMPLYWLVGLNRNFLAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISKQEIPNYWIFMHYISLFKYPFEGFLINEFSNSGKCLEYMFGACIKSGEDVLKEEGYGGESNRWKNVGVTVCFILVYRFISYVILRYRCSQRGFGRVVTN* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1639 649 Gene3D - 48 309 IPR027417 -
Gso5g1639 649 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524
Gso5g1639 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 269 IPR027417 -
Gso5g1639 649 Pfam ABC-2 type transporter 371 579 IPR013525 GO:0016020|GO:0140359
Gso5g1639 649 Pfam ABC transporter 61 209 IPR003439 GO:0005524
Gso5g1639 649 SMART AAA_5 70 259 IPR003593 -
Gso5g1639 649 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 3 637 - -
Gso5g1639 649 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 637 - -
Gso5g1639 649 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 45 282 IPR003439 GO:0005524
Gso5g1639 649 CDD ABCG_EPDR 55 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1639 Gso-Chr5 39698129 39700461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1639 59 287 Calmodulin-binding Proteins AT2G36910 22.857 1.95e-14 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1639 K05681 - gmx:100789722 1249.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1639 5 39698129 39700461 Gso8g0006 8 63559 65973 GST