Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1637 ATGATGGCTTGTGGAAGTGTCAACCTTCCTCCTGGCTTTTGCTTCTCTCCAACTGATGAAGAACTCGTCCTTCACTTTCTCTGTTCCAAGGCTTCTCTACCATGCCATCCCAACATCATTCCAGAGCTTGACCTCTCTCTGCTTGATCCATGGGAATTAAATGGTAAGGCGTTGTCAAGTGGAAATCAACACTATTTCTTCACCAAAGTGAAGGAGAACAGATCCACAGAAAATGGGTATTGGAAGGAAATAGGAGTCATGGAACCAATAGTATCCTCTTCTGAAAAAGTGGGGATCAAGAAGTACCTTGTGTTCAACCTTGGTGAAGCTCCACAAGGCACTGAAACCAGTTGGGTCATGCAAGAATATCATATTTGCTCATCCGGGTTTAACACTACTACTGCATCTAATTGTGCAAGTACTCGCGGAAGACGAAAAACTGATCAATGTGGGAGCAAATGGGTATTGTGCAAAGCCTATGAAAAGAAAAGTTGTCAATCCCAACAAGGTGTAAATTGTTACAGCGATGAGGATGACTGCGGAACTGAGCTTTCATGGCTAGACGAATTTTATATGTCGTTAGATGATGATCTTGAAGAAGTTATGAGCCTGCCTAGCTAA 621 0.4283 MMACGSVNLPPGFCFSPTDEELVLHFLCSKASLPCHPNIIPELDLSLLDPWELNGKALSSGNQHYFFTKVKENRSTENGYWKEIGVMEPIVSSSEKVGIKKYLVFNLGEAPQGTETSWVMQEYHICSSGFNTTTASNCASTRGRRKTDQCGSKWVLCKAYEKKSCQSQQGVNCYSDEDDCGTELSWLDEFYMSLDDDLEEVMSLPS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1637 206 PANTHER NAC TRANSCRIPTION FACTOR 56 3 201 - -
Gso5g1637 206 Pfam No apical meristem (NAM) protein 10 125 IPR003441 GO:0003677|GO:0006355
Gso5g1637 206 ProSiteProfiles NAC domain profile. 9 162 IPR003441 GO:0003677|GO:0006355
Gso5g1637 206 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 3 201 - -
Gso5g1637 206 SUPERFAMILY NAC domain 3 162 IPR036093 GO:0003677|GO:0006355
Gso5g1637 206 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1637 Gso-Chr5 39679403 39680551 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1637 2 166 NAC Transcription Factor Family AT1G61110 42.857 1.14e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso5g1637 NAM 5.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1637 - - gmx:100779578 438.343