Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1607 ATGACGAGATCGGAGCCGCGCGCTTGGAAGTTGCGGCAGAGGTCGGAAGTTGAAGATTCTCCTAAGTTCGGCGTGACGTCAGTTTGCGGCAGGAGAAGAGATATGGAAGATTCTGTTTTGGTGCAGCCTTCCTTCACCCAAGGCTTCCACTACTTTGGCATTTTCGATGGTCACGGTTGCTCTCATGTTGCAACTATGTGCAAGGAGCGGTTACACGAGATCGTGAATGAAGAAATTGACAGCGCGCACGAGAATTTGGAGTGGAAGCTAACAATGGAGAATAGATTTGCTCGCATGGACGACGAGGTTAATTGCAAGAGTCAGAGCAACCAGACCTTCACTTGCAGGTGCGAGCTCCAGACTCCCCATTGCGACGCCGTCGGATTCACCGTCGCCATCGTCACGCCGGACAAACTTGTCGTCTCCAACTGCGGCGACTCCCGCACCGTCCTCTGCCAGAAAGGCTTGCGTAGTTCTTCTGGTTTATTAACTGACTTTATGATCTGA 507 0.5187 MTRSEPRAWKLRQRSEVEDSPKFGVTSVCGRRRDMEDSVLVQPSFTQGFHYFGIFDGHGCSHVATMCKERLHEIVNEEIDSAHENLEWKLTMENRFARMDDEVNCKSQSNQTFTCRCELQTPHCDAVGFTVAIVTPDKLVVSNCGDSRTVLCQKGLRSSSGLLTDFMI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1607 168 CDD PP2Cc 22 155 IPR001932 -
Gso5g1607 168 Pfam Protein phosphatase 2C 23 155 IPR001932 -
Gso5g1607 168 ProSiteProfiles PPM-type phosphatase domain profile. 22 168 IPR001932 -
Gso5g1607 168 PANTHER ALPHABET, ISOFORM E-RELATED 17 155 - -
Gso5g1607 168 ProSitePatterns PPM-type phosphatase domain signature. 51 59 IPR000222 GO:0043169
Gso5g1607 168 SMART PP2C_4 10 168 IPR001932 -
Gso5g1607 168 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 17 155 - -
Gso5g1607 168 SUPERFAMILY PP2C-like 20 155 IPR036457 -
Gso5g1607 168 Gene3D - 17 165 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1607 Gso-Chr5 39354503 39357396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1607 20 155 PP2C-type Phosphatase Gene Family AT2G29380 57.241 4.22e-54 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1607 K14497 - gmx:102667648 352.443