Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1587 ATGGGGTGCGTTAACACCAAATACACTCCTCCTCGGAGGAACGCTGAGAGGTTGAAACGAAACAAGGAGCAGCATGCACCCAAACCAATCATTACTACACACTCATCTAACAAGCACGTTGACGTGTTGGAAGACAAAGAAATTAGAGATAATACTAGTAGCAAGGTAGAGGCTGTTGCTACAAACGATGACAAGAGTCATGAGCTTGCTAATGCTTCAGAGGAGAAGAACAACACTGCACGCTATGAGTTTGTGGAAGGCTGGCCAAAATGGCTCGTTGATAATATCCCTCCAAACGTTTTGGCTAGTTTGGTTCCCAAGAGTGTTGATTCCTATGACAAACTCGGAAAGGTGGGGCGTGGAACATATAGCAATGTATACAAAGCCCGAGATAAAGATACTGGGAAGATTGTTGCTTTGAAGAAGGTAAGATTTGACACATCTGATCCTGAAAGCATAAAGTTTATGGCAAGAGAGATAATGATACTGCAGGCTCTGGATCATCCCAATGTCATGAAACTGGAAGGACTAGCAACATCAAGGATGCAGTATAGTCTTTATATTGTTTTTGATTACATGCATTCTGACCTTACAAGAATTATCTCCCGGCCTGGGGAGAAACTCACTGAACCACAGATCAAGTGTTATATGAAGCAGCTGCTTTTGGGGCTGCAGCATTGTCATAAGAGGGGAGTTATGCATAGAGATATTAAACCTTCTAACTTGTTAGTAGATAAAAAAGGGGTGCTAAAAATTGCAGATTTTGGGCTGGCAAATTCTTTCGCTATCAAACCTGAAGGACCTTTTACAAATCGAGTGGTGACACTTTGGTATAGAGCTCCTGAACTTCTTTTAGGATCAACAGATTATGGATATGAAATTGATCTCTGGAGTGCAGGATGCTTGTTGGCCGAGATGTTCCTTGGAAGACCAATTATGCCCGGGAGGACCGAGGTTGAACAGCTTCACATGATTTTCAAACTTTGTGGTTCACCTTCAGCGGATTACTGGATAAAAATGAAGCTAATGACAAGCTTCCGTCCACCACCACATTATAAAGCTAATTATGAAGAAAATTTCAAGGATTTTCCTTCCTCTGCCTGTGCTCTCTTGGCCACTCTTCTTGATCTAGACTCTTACTCTCGTGGCACCGCTGCCTCTGCTCTTGAAAGTGAATTTTTCACGTCAAGTCCATTAGCATGTGACCTTTCAGCGCTACCAGTGATCTACAAAGACGACGGCGAACGCTCACAAACAAAGAGACGCAAAAGGCGCAAGGGTCTGAAAAAAAAAGGGCATGTATATCAAACAAGTGCATGCAATGTGAGTCAGTCACGAAAGAACCAAACTGCTGAACAAAGCAGGAGAGATTCAGAATCAGCAAAAGAGAAGAGTGTGGCACAAGACATGAAATGTGAAGAAACAGGGAAAAGTGGAAGCAGCACATGGTCACTCTTTATGAACGAGAGGAGCATGAATGCATCTATATCCCCCGTTTTTCTCTCCAGTGTGAGAAAATCCCCCAAAACCGAGGGCCATCCTAATGCTCTTAAGAACATAAAAAACTATACCCTCTGGCAAGCATCTATAATTGATATGATCAATCGCAATGAACTTGGTCCCTTGCGCAAGTCCTTTTCTGCAATGGATATTCGACTTGATCCAGAGAATCTATCAAGCCTCTACGAACCAAATAAGAAGTTGGGCCACGAAATGTAA 1719 0.4276 MGCVNTKYTPPRRNAERLKRNKEQHAPKPIITTHSSNKHVDVLEDKEIRDNTSSKVEAVATNDDKSHELANASEEKNNTARYEFVEGWPKWLVDNIPPNVLASLVPKSVDSYDKLGKVGRGTYSNVYKARDKDTGKIVALKKVRFDTSDPESIKFMAREIMILQALDHPNVMKLEGLATSRMQYSLYIVFDYMHSDLTRIISRPGEKLTEPQIKCYMKQLLLGLQHCHKRGVMHRDIKPSNLLVDKKGVLKIADFGLANSFAIKPEGPFTNRVVTLWYRAPELLLGSTDYGYEIDLWSAGCLLAEMFLGRPIMPGRTEVEQLHMIFKLCGSPSADYWIKMKLMTSFRPPPHYKANYEENFKDFPSSACALLATLLDLDSYSRGTAASALESEFFTSSPLACDLSALPVIYKDDGERSQTKRRKRRKGLKKKGHVYQTSACNVSQSRKNQTAEQSRRDSESAKEKSVAQDMKCEETGKSGSSTWSLFMNERSMNASISPVFLSSVRKSPKTEGHPNALKNIKNYTLWQASIIDMINRNELGPLRKSFSAMDIRLDPENLSSLYEPNKKLGHEM* 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1587 572 Gene3D Phosphorylase Kinase; domain 1 101 194 - -
Gso5g1587 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Gso5g1587 572 MobiDBLite consensus disorder prediction 1 37 - -
Gso5g1587 572 MobiDBLite consensus disorder prediction 414 480 - -
Gso5g1587 572 MobiDBLite consensus disorder prediction 12 27 - -
Gso5g1587 572 ProSiteProfiles Protein kinase domain profile. 112 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1587 572 Gene3D Transferase(Phosphotransferase) domain 1 195 435 - -
Gso5g1587 572 MobiDBLite consensus disorder prediction 450 471 - -
Gso5g1587 572 PANTHER CELL DIVISION PROTEIN KINASE 66 491 - -
Gso5g1587 572 PANTHER CYCLIN-DEPENDENT KINASE 66 491 - -
Gso5g1587 572 Pfam Protein kinase domain 112 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1587 572 SMART serkin_6 112 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso5g1587 572 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Gso5g1587 572 SUPERFAMILY Protein kinase-like (PK-like) 106 399 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1587 Gso-Chr5 39180374 39187511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1587 97 426 Core Cell Cycle Gene Families AT5G10270 45.690 1.27e-96 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Gso5g1587 Pkinase 2.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1587 K08819 - gmx:102667260 1127.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1587 5 39180374 39187511 Gso5g1587 5 39180374 39187511 ECH