Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso5g1579 ATGTCAACAACTTCCCATTCCATTGTTCACCACAGCTTATTCGAGGAGCAGGATCAGATGCCTACACAGATAGGTTTCTTTCCCTTTCCAACAAACCTTACTTTCCCTCCTTTGGGTTGCCATCAATCCTCTCTGAAAGCTGCTCAAAAGTCAAGGGAAGACCTCACTTCTAGCTTTCGAGGAGCTCAATTCCTATCCTTGCATAGATTAAGTGTAAATCCATGGGCACTGGGAGAAGTGGCTGATTGCTTCAGCTGTAAAAGAAGTGGAATTGATGATCATCATCTCGGAATTTCAGCCACGAAGATGAAGAAAATCAAGGCAAGAAGGAAGGTGAGAGAGCCTAGGTTTTGCTTCAAGACCATGAGCGATATGGATGTATTGGACGATGGCTACAAGTGGAGGAAGTATGGACAGAAAGTTGTGAAGAGCACGCATCACCCTAGAAGCTATTACCGTTGCATACAAGATAATTGTCGTGTAAAGAAACGAGTGGAACGCTTCGCCGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGTTCACTCTCCATCAAATGATCTCGAAGACTCCATCTCAACTTGA 594 0.4444 MSTTSHSIVHHSLFEEQDQMPTQIGFFPFPTNLTFPPLGCHQSSLKAAQKSREDLTSSFRGAQFLSLHRLSVNPWALGEVADCFSCKRSGIDDHHLGISATKMKKIKARRKVREPRFCFKTMSDMDVLDDGYKWRKYGQKVVKSTHHPRSYYRCIQDNCRVKKRVERFAEDPRMVITTYEGRHVHSPSNDLEDSIST* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso5g1579 197 Pfam WRKY DNA -binding domain 129 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso5g1579 197 ProSiteProfiles WRKY domain profile. 123 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso5g1579 197 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 72 194 - -
Gso5g1579 197 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 72 194 IPR044810 GO:0003700
Gso5g1579 197 Gene3D WRKY domain 115 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso5g1579 197 SUPERFAMILY WRKY DNA-binding domain 120 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso5g1579 197 SMART WRKY_cls 128 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso5g1579 Gso-Chr5 39133584 39135470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso5g1579 98 197 WRKY Transcription Factor Family AT4G39410 80.198 4.94e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso5g1579 WRKY 2.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso5g1579 - - gsj:114411556 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1579 5 39133584 39135470 Gso5g1579 5 39133584 39135470 ECH
Gso5g1579 5 39133584 39135470 Gso8g1209 8 11032356 11034795 GST